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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G182480
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G182480
Cyclotella cryptica
0.0e+00
1543.5
756
100.0
sya00G69610
Synedra acus
8.0e-290
997.7
753
63.2
ptri123680
Phaeodactylum tricornutum
1.5e-272
940.3
758
61.1
fso159800
Fistulifera solaris
1.3e-268
927.2
766
59.9
fso36160
Fistulifera solaris
6.6e-268
924.9
769
60.1
gene5032
Fragilariopsis cylindrus
1.8e-257
890.2
763
57.8
Ec-28_003190
Ectocarpus siliculosus
5.3e-241
835.5
782
54.7
gsu94880
Galdieria sulphuraria
4.0e-196
686.4
756
47.6
ccr88320
Chondrus crispus
1.8e-180
634.4
761
45.5
Cre03.g180750
Chlamydomonas reinhardtii
2.0e-179
630.9
791
45.3
Naga_100011g54
Nannochloropsis gaditana
2.9e-170
600.5
771
43.2
AT5G20980
Arabidopsis thaliana
6.2e-157
556.2
768
40.8
Pp3c26_7220
Physcomitrella patens
4.4e-155
550.1
773
40.8
Pp3c21_3730
Physcomitrella patens
6.4e-154
546.2
773
40.2
Pp3c18_21210
Physcomitrella patens
1.4e-153
545.0
777
40.5
SPAC9.09
Schizosaccharomyces pombe
3.2e-153
543.9
779
40.8
AT3G03780
Arabidopsis thaliana
3.5e-152
540.4
770
40.6
AT5G17920
Arabidopsis thaliana
1.9e-150
534.6
769
40.3
CM10G02360
Cyanidioschyzon merolae
3.6e-149
530.4
773
40.5
gene5923
Fragilariopsis cylindrus
1.8e-148
528.1
764
40.1
Naga_100793g2
Nannochloropsis gaditana
1.1e-145
518.8
817
37.7
YER091C
Saccharomyces cerevisiae strain S288C
2.7e-144
514.2
780
40.0
Pp3c3_29280
Physcomitrella patens
2.7e-96
354.8
670
34.5
sya00G178840
Synedra acus
3.8e-90
334.3
295
56.3
Sro660_g182940
Seminavis robusta
2.1e-51
205.7
294
43.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing