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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G17610
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G17610
Cyclotella cryptica
2.0e-217
756.1
375
100.0
CC00G00700
Cyclotella cryptica
2.3e-181
636.3
358
88.3
CC00G120870
Cyclotella cryptica
2.3e-181
636.3
358
88.3
CC00G37390
Cyclotella cryptica
3.8e-155
549.3
362
78.5
CC00G101490
Cyclotella cryptica
5.4e-154
545.4
358
78.8
CC00G166190
Cyclotella cryptica
7.1e-138
491.9
292
85.3
CC00G45280
Cyclotella cryptica
5.1e-120
432.6
242
87.2
CC00G35440
Cyclotella cryptica
2.9e-115
416.8
234
89.3
CC00G161440
Cyclotella cryptica
1.9e-114
414.1
354
60.2
tho86000
Thalassiosira oceanica
5.5e-90
332.8
323
53.6
CC00G63160
Cyclotella cryptica
1.7e-86
321.2
186
86.6
tho158140
Thalassiosira oceanica
1.2e-84
315.1
263
57.0
CC00G149300
Cyclotella cryptica
1.6e-81
304.7
254
58.7
CC00G89560
Cyclotella cryptica
9.2e-69
262.3
142
91.5
CC00G89570
Cyclotella cryptica
3.4e-63
243.8
139
87.8
sya00G266280
Synedra acus
1.0e-59
232.3
249
47.8
fso63650
Fistulifera solaris
9.5e-50
199.1
262
39.3
sya00G256280
Synedra acus
5.8e-47
189.9
285
36.1
tho633240
Thalassiosira oceanica
1.1e-45
185.7
146
58.9
tho89800
Thalassiosira oceanica
2.2e-38
161.4
130
60.0
sya00G206120
Synedra acus
8.4e-38
159.5
139
55.4
CC00G108090
Cyclotella cryptica
3.2e-37
157.5
89
87.6
sya00G170370
Synedra acus
2.7e-36
154.5
266
32.7
CC00G160950
Cyclotella cryptica
4.3e-34
147.1
81
87.7
tho219020
Thalassiosira oceanica
4.7e-33
143.7
232
34.9
tho543480
Thalassiosira oceanica
1.4e-32
142.1
120
55.8
sya00G158100
Synedra acus
2.4e-32
141.4
305
33.4
fso95610
Fistulifera solaris
6.9e-32
139.8
277
30.3
tho123740
Thalassiosira oceanica
1.2e-31
139.0
245
31.8
tho78180
Thalassiosira oceanica
4.4e-31
137.1
234
33.3
tho94380
Thalassiosira oceanica
1.3e-30
135.6
218
35.8
CC00G87410
Cyclotella cryptica
2.9e-30
134.4
112
57.1
tho83920
Thalassiosira oceanica
2.4e-29
131.3
238
35.7
tho89820
Thalassiosira oceanica
5.4e-29
130.2
110
54.5
tho16720
Thalassiosira oceanica
9.3e-29
129.4
238
33.6
tho94400
Thalassiosira oceanica
9.3e-29
129.4
248
32.7
tho131480
Thalassiosira oceanica
1.3e-27
125.6
252
34.1
sya00G185170
Synedra acus
2.3e-27
124.8
136
46.3
Sro1780_g078321
Seminavis robusta
5.1e-27
123.6
271
31.4
CC00G06130
Cyclotella cryptica
6.6e-27
123.2
236
32.6
fso200830
Fistulifera solaris
6.6e-27
123.2
249
31.7
CC00G144660
Cyclotella cryptica
8.7e-27
122.9
111
55.0
tho64380
Thalassiosira oceanica
2.8e-25
117.9
237
33.3
fso11860
Fistulifera solaris
3.6e-25
117.5
352
27.0
tho105160
Thalassiosira oceanica
3.6e-25
117.5
237
33.8
fso06610
Fistulifera solaris
6.2e-25
116.7
352
27.0
tho197380
Thalassiosira oceanica
1.4e-24
115.5
230
33.9
fso11910
Fistulifera solaris
1.8e-24
115.2
250
30.8
tho20420
Thalassiosira oceanica
5.3e-24
113.6
236
33.5
fso121990
Fistulifera solaris
9.0e-24
112.8
250
30.8
CC00G170410
Cyclotella cryptica
1.2e-23
112.5
60
88.3
tho385140
Thalassiosira oceanica
4.5e-23
110.5
178
37.6
CC00G15910
Cyclotella cryptica
1.3e-22
109.0
64
84.4
fso181140
Fistulifera solaris
2.2e-22
108.2
246
30.1
fso174580
Fistulifera solaris
4.9e-22
107.1
245
30.2
CC00G100660
Cyclotella cryptica
1.9e-21
105.1
209
31.6
tho56660
Thalassiosira oceanica
1.9e-21
105.1
235
30.6
CC00G141300
Cyclotella cryptica
1.6e-20
102.1
246
30.1
CC00G30360
Cyclotella cryptica
2.1e-20
101.7
237
30.0
sya00G45490
Synedra acus
7.9e-20
99.8
275
26.2
sya00G236680
Synedra acus
7.9e-20
99.8
275
26.2
tho338540
Thalassiosira oceanica
7.9e-20
99.8
240
30.0
tho111660
Thalassiosira oceanica
1.0e-19
99.4
240
29.6
sya00G229840
Synedra acus
1.8e-19
98.6
275
26.2
tho293920
Thalassiosira oceanica
2.3e-19
98.2
240
29.6
ccr162020
Chondrus crispus
5.1e-19
97.1
253
29.2
sya00G239850
Synedra acus
1.1e-18
95.9
116
39.7
fso76400
Fistulifera solaris
1.5e-18
95.5
256
25.0
ptri237730
Phaeodactylum tricornutum
2.5e-18
94.7
117
38.5
ccr162420
Chondrus crispus
3.3e-18
94.4
253
28.9
CC00G35370
Cyclotella cryptica
3.3e-18
94.4
239
30.1
ccr12540
Chondrus crispus
4.3e-18
94.0
253
29.2
ccr12560
Chondrus crispus
4.3e-18
94.0
253
29.2
ccr12600
Chondrus crispus
7.4e-18
93.2
245
29.8
sya00G110500
Synedra acus
7.4e-18
93.2
192
30.2
CC00G132530
Cyclotella cryptica
9.6e-18
92.8
52
86.5
sya00G35570
Synedra acus
1.6e-17
92.0
219
28.3
ccr12580
Chondrus crispus
3.7e-17
90.9
251
28.7
ccr162000
Chondrus crispus
3.1e-16
87.8
258
28.3
sya00G153830
Synedra acus
5.3e-16
87.0
130
38.5
sya00G15730
Synedra acus
6.9e-16
86.7
98
39.8
sya00G08370
Synedra acus
3.4e-15
84.3
80
48.8
sya00G247220
Synedra acus
3.4e-15
84.3
275
24.7
CC00G170210
Cyclotella cryptica
5.8e-15
83.6
168
31.0
sya00G151100
Synedra acus
9.9e-15
82.8
84
42.9
Ec-07_000280
Ectocarpus siliculosus
4.9e-14
80.5
173
31.2
sya00G238580
Synedra acus
1.6e-12
75.5
219
26.0
Naga_100533g2
Nannochloropsis gaditana
4.6e-12
73.9
174
28.7
Naga_101948g1
Nannochloropsis gaditana
6.0e-12
73.6
148
30.4
Naga_100497g3
Nannochloropsis gaditana
6.0e-12
73.6
217
25.8
Sro114_g056420
Seminavis robusta
6.0e-12
73.6
248
27.0
tho99520
Thalassiosira oceanica
7.9e-12
73.2
165
32.7
CC00G170920
Cyclotella cryptica
1.8e-11
72.0
221
27.6
sya00G103790
Synedra acus
2.3e-11
71.6
192
28.1
ptri214430
Phaeodactylum tricornutum
3.0e-11
71.2
255
25.5
CC00G163140
Cyclotella cryptica
5.1e-11
70.5
252
26.2
Pp3c19_10880
Physcomitrella patens
8.7e-11
69.7
232
25.0
sya00G62270
Synedra acus
8.7e-11
69.7
246
24.0
sya00G198350
Synedra acus
8.7e-11
69.7
126
30.2
ccr12660
Chondrus crispus
1.9e-10
68.6
176
29.0
CC00G152980
Cyclotella cryptica
1.9e-10
68.6
236
25.0
Pp3c11_12670
Physcomitrella patens
5.6e-10
67.0
257
23.7
sya00G191580
Synedra acus
5.6e-10
67.0
190
26.8
sya00G128410
Synedra acus
7.4e-10
66.6
80
37.5
Naga_100252g7
Nannochloropsis gaditana
2.1e-09
65.1
158
27.8
Pp3c7_15950
Physcomitrella patens
2.8e-09
64.7
233
25.8
sya00G49300
Synedra acus
4.8e-09
63.9
86
32.6
sya00G57360
Synedra acus
6.2e-09
63.5
208
24.0
CC00G16360
Cyclotella cryptica
3.1e-08
61.2
173
27.7
Naga_101449g1
Nannochloropsis gaditana
3.1e-08
61.2
277
26.0
sya00G49730
Synedra acus
4.0e-08
60.8
169
27.2
sya00G140690
Synedra acus
5.3e-08
60.5
86
32.6
sya00G28400
Synedra acus
6.9e-08
60.1
119
32.8
sya00G102460
Synedra acus
6.9e-08
60.1
164
27.4
sya00G212950
Synedra acus
6.9e-08
60.1
190
24.7
ccr12640
Chondrus crispus
1.2e-07
59.3
151
29.1
sya00G213800
Synedra acus
1.2e-07
59.3
97
26.8
sya00G246540
Synedra acus
2.0e-07
58.5
219
23.3
sya00G207820
Synedra acus
1.7e-06
55.5
173
25.4
sya00G245830
Synedra acus
1.7e-06
55.5
146
27.4
Pp3c23_1320
Physcomitrella patens
6.5e-06
53.5
133
25.6
sya00G215520
Synedra acus
6.5e-06
53.5
92
25.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (24 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (30 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (9 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (35 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing