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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G174780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G174780
Cyclotella cryptica
1.6e-74
280.0
139
100.0
tps145690
Thalassiosira pseudonana
9.9e-61
234.2
132
85.6
tho283860
Thalassiosira oceanica
1.4e-59
230.3
139
80.6
sya00G261030
Synedra acus
7.1e-51
201.4
137
74.5
Sro227_g092340
Seminavis robusta
3.0e-49
196.1
133
71.4
ps00G185100
Pseudo-nitzschia multiseries
1.4e-43
177.2
135
68.1
PSNMU-V1.4_AUG-EV-PASAV3_0013630
Pseudo-nitzschia multistriata
3.2e-43
176.0
135
65.2
gene8698
Fragilariopsis cylindrus
2.1e-42
173.3
132
66.7
fso136020
Fistulifera solaris
6.0e-42
171.8
141
65.2
fso106130
Fistulifera solaris
1.0e-41
171.0
140
65.7
ptri203350
Phaeodactylum tricornutum
5.3e-38
158.7
147
57.1
ptri203390
Phaeodactylum tricornutum
6.9e-38
158.3
147
57.1
Ec-19_000840
Ectocarpus siliculosus
1.1e-32
141.0
138
49.3
ENSG00000256060
Homo sapiens
3.4e-29
129.4
138
46.4
ENSG00000196459
Homo sapiens
3.4e-29
129.4
138
46.4
Pp3c14_6180
Physcomitrella patens
2.1e-26
120.2
138
44.2
FBgn0266724
Drosophila melanogaster
1.0e-25
117.9
136
42.6
AT1G80500
Arabidopsis thaliana
2.3e-25
116.7
138
43.5
WBGene00021046
Caenorhabditis elegans
9.7e-24
111.3
135
43.0
SPBC11G11.04
Schizosaccharomyces pombe
6.3e-23
108.6
130
36.2
ccr171340
Chondrus crispus
7.7e-21
101.7
134
38.8
Cre13.g571600
Chlamydomonas reinhardtii
7.7e-21
101.7
139
34.5
emh520950
Emiliania huxleyi
8.5e-20
98.2
126
39.7
emh42870
Emiliania huxleyi
8.5e-20
98.2
126
39.7
Ec-19_000860
Ectocarpus siliculosus
3.2e-19
96.3
79
58.2
gsu94070
Galdieria sulphuraria
6.1e-18
92.0
133
34.6
YBR254C
Saccharomyces cerevisiae strain S288C
7.4e-16
85.1
173
30.6
gsu94090
Galdieria sulphuraria
1.1e-11
71.2
105
34.3
pte182280
Paramecium tetraurelia
1.5e-08
60.8
129
27.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing