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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G17280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G17280
Cyclotella cryptica
3.9e-134
478.8
234
100.0
tps166790
Thalassiosira pseudonana
5.4e-120
431.8
234
89.3
tho213980
Thalassiosira oceanica
2.1e-108
393.3
234
81.2
sya00G253130
Synedra acus
1.8e-86
320.5
226
69.5
ptri78940
Phaeodactylum tricornutum
1.1e-83
311.2
225
68.9
Sro624_g177410
Seminavis robusta
5.9e-82
305.4
213
71.4
fso167230
Fistulifera solaris
2.9e-81
303.1
229
66.4
PSNMU-V1.4_AUG-EV-PASAV3_0050370
Pseudo-nitzschia multistriata
6.5e-81
302.0
235
65.1
fso189480
Fistulifera solaris
2.7e-79
296.6
226
64.2
gene3137
Fragilariopsis cylindrus
3.6e-79
296.2
226
64.6
gene16086
Fragilariopsis cylindrus
6.3e-76
285.4
217
65.0
ps00G90730
Pseudo-nitzschia multiseries
1.4e-75
284.3
224
66.5
AA0012G00920
Aureococcus anophagefferens
7.7e-74
278.5
227
61.2
Ec-12_005780
Ectocarpus siliculosus
1.0e-70
268.1
224
60.3
gsu61150
Galdieria sulphuraria
3.8e-65
249.6
225
56.9
ccr190440
Chondrus crispus
6.5e-65
248.8
225
55.1
emh549890
Emiliania huxleyi
1.9e-64
247.3
221
58.4
FBgn0036314
Drosophila melanogaster
7.2e-64
245.4
226
56.6
ENSG00000104897
Homo sapiens
3.6e-63
243.0
232
53.9
AT2G32600
Arabidopsis thaliana
3.0e-62
240.0
217
55.8
Naga_100032g12
Nannochloropsis gaditana
8.8e-62
238.4
202
58.4
Pp3c15_8160
Physcomitrella patens
3.4e-61
236.5
219
55.7
Cre06.g252700
Chlamydomonas reinhardtii
2.2e-60
233.8
217
53.5
WBGene00008683
Caenorhabditis elegans
2.8e-60
233.4
224
54.5
Pp3c9_13030
Physcomitrella patens
1.4e-59
231.1
219
54.8
pte133840
Paramecium tetraurelia
1.5e-56
221.1
231
49.4
pte346800
Paramecium tetraurelia
1.9e-56
220.7
231
49.4
SPBC21C3.05
Schizosaccharomyces pombe
1.9e-56
220.7
224
52.7
CM08G01020
Cyanidioschyzon merolae
2.8e-07
57.4
43
53.5
CM14G00950
Cyanidioschyzon merolae
2.8e-07
57.4
43
53.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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