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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G170920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G170920
Cyclotella cryptica
6.8e-235
814.3
408
100.0
CC00G16360
Cyclotella cryptica
7.1e-99
362.5
202
88.6
CC00G36700
Cyclotella cryptica
2.6e-69
264.2
229
61.1
CC00G67460
Cyclotella cryptica
5.9e-61
236.5
133
88.7
CC00G20910
Cyclotella cryptica
1.7e-52
208.4
188
55.3
sya00G238580
Synedra acus
2.7e-50
201.1
254
41.3
sya00G59300
Synedra acus
6.7e-49
196.4
470
29.6
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
2.8e-47
191.0
502
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
1.1e-46
189.1
502
29.9
sya00G246540
Synedra acus
1.8e-46
188.3
243
40.7
CC00G109430
Cyclotella cryptica
1.5e-45
185.3
178
51.1
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
3.8e-44
180.6
502
28.9
sya00G62270
Synedra acus
1.4e-43
178.7
260
37.3
sya00G103790
Synedra acus
1.2e-42
175.6
222
44.1
sya00G181920
Synedra acus
1.4e-41
172.2
397
31.7
sya00G03650
Synedra acus
1.1e-40
169.1
229
41.0
sya00G57360
Synedra acus
1.5e-40
168.7
217
41.0
sya00G191580
Synedra acus
9.7e-40
166.0
204
45.1
sya00G212950
Synedra acus
1.3e-39
165.6
208
42.8
sya00G59780
Synedra acus
3.1e-38
161.0
457
26.9
CC00G07460
Cyclotella cryptica
4.1e-38
160.6
127
69.3
sya00G180660
Synedra acus
2.5e-35
151.4
395
30.6
sya00G93160
Synedra acus
4.7e-34
147.1
172
44.2
sya00G93260
Synedra acus
4.7e-34
147.1
172
44.2
sya00G93190
Synedra acus
6.7e-33
143.3
172
43.6
sya00G207820
Synedra acus
2.0e-32
141.7
188
40.4
sya00G245830
Synedra acus
1.3e-31
139.0
153
47.1
sya00G79880
Synedra acus
1.8e-30
135.2
155
44.5
sya00G102460
Synedra acus
1.8e-30
135.2
165
46.1
sya00G210010
Synedra acus
2.9e-28
127.9
147
43.5
sya00G221970
Synedra acus
1.0e-25
119.4
143
43.4
sya00G186020
Synedra acus
4.4e-24
114.0
192
36.5
sya00G146680
Synedra acus
2.8e-23
111.3
243
30.5
sya00G49690
Synedra acus
1.3e-20
102.4
156
39.7
sya00G60910
Synedra acus
1.7e-20
102.1
128
41.4
Sro59_g034310
Seminavis robusta
5.0e-20
100.5
150
38.0
sya00G59140
Synedra acus
8.6e-20
99.8
131
40.5
sya00G65920
Synedra acus
1.9e-19
98.6
108
43.5
sya00G158680
Synedra acus
2.5e-19
98.2
107
43.9
sya00G253490
Synedra acus
4.2e-19
97.4
107
43.9
sya00G92690
Synedra acus
2.8e-18
94.7
110
48.2
sya00G165500
Synedra acus
3.6e-18
94.4
91
48.4
sya00G156700
Synedra acus
8.0e-18
93.2
108
43.5
sya00G49780
Synedra acus
1.0e-17
92.8
104
45.2
sya00G209520
Synedra acus
1.4e-17
92.4
156
37.2
CC00G178130
Cyclotella cryptica
2.3e-17
91.7
51
92.2
sya00G05190
Synedra acus
3.0e-17
91.3
128
39.8
ps00G26680
Pseudo-nitzschia multiseries
7.5e-16
86.7
253
30.0
fso163300
Fistulifera solaris
1.3e-15
85.9
234
26.5
CC00G35440
Cyclotella cryptica
1.7e-15
85.5
215
29.8
sya00G225640
Synedra acus
1.7e-15
85.5
91
44.0
tho86000
Thalassiosira oceanica
2.8e-15
84.7
219
28.3
CC00G45280
Cyclotella cryptica
6.3e-15
83.6
220
28.2
tho78180
Thalassiosira oceanica
1.4e-14
82.4
232
29.7
tho123740
Thalassiosira oceanica
1.8e-14
82.0
232
29.7
CC00G45850
Cyclotella cryptica
2.4e-14
81.6
102
43.1
sya00G122890
Synedra acus
2.4e-14
81.6
116
40.5
sya00G99780
Synedra acus
5.4e-14
80.5
197
28.4
sya00G271160
Synedra acus
5.4e-14
80.5
114
37.7
sya00G225580
Synedra acus
9.2e-14
79.7
102
43.1
sya00G93180
Synedra acus
2.7e-13
78.2
139
35.3
Naga_100167g13
Nannochloropsis gaditana
3.5e-13
77.8
264
24.6
CC00G17610
Cyclotella cryptica
4.5e-13
77.4
221
27.6
sya00G248190
Synedra acus
4.5e-13
77.4
99
38.4
sya00G151540
Synedra acus
5.9e-13
77.0
90
42.2
sya00G60900
Synedra acus
7.8e-13
76.6
148
32.4
Naga_101142g1
Nannochloropsis gaditana
1.7e-12
75.5
395
23.3
sya00G62260
Synedra acus
1.7e-12
75.5
96
42.7
CC00G149300
Cyclotella cryptica
2.9e-12
74.7
220
28.6
sya00G03850
Synedra acus
2.9e-12
74.7
87
44.8
sya00G214840
Synedra acus
3.8e-12
74.3
85
41.2
CC00G37390
Cyclotella cryptica
1.5e-11
72.4
167
31.1
sya00G161340
Synedra acus
1.9e-11
72.0
99
37.4
CC00G166190
Cyclotella cryptica
5.6e-11
70.5
189
29.1
tho94380
Thalassiosira oceanica
9.5e-11
69.7
220
26.4
sya00G145620
Synedra acus
2.1e-10
68.6
70
45.7
sya00G75970
Synedra acus
6.1e-10
67.0
128
33.6
sya00G177030
Synedra acus
1.8e-09
65.5
96
36.5
tho329240
Thalassiosira oceanica
8.9e-09
63.2
153
28.8
CC00G30360
Cyclotella cryptica
1.2e-08
62.8
210
27.6
sya00G76460
Synedra acus
1.5e-08
62.4
45
60.0
sya00G158100
Synedra acus
3.4e-08
61.2
182
27.5
CC00G13810
Cyclotella cryptica
4.4e-08
60.8
42
66.7
sya00G103640
Synedra acus
4.4e-08
60.8
45
55.6
sya00G197450
Synedra acus
1.3e-07
59.3
63
42.9
Sro882_g215390
Seminavis robusta
1.7e-07
58.9
73
39.7
sya00G206160
Synedra acus
1.7e-07
58.9
81
39.5
Sro4424_g353970
Seminavis robusta
2.2e-07
58.5
74
37.8
sya00G236010
Synedra acus
2.2e-07
58.5
97
35.1
Naga_100055g1
Nannochloropsis gaditana
2.9e-07
58.2
148
28.4
tho56660
Thalassiosira oceanica
3.7e-07
57.8
245
24.1
tho338540
Thalassiosira oceanica
4.9e-07
57.4
224
24.1
Naga_100252g7
Nannochloropsis gaditana
6.4e-07
57.0
163
27.0
sya00G210080
Synedra acus
6.4e-07
57.0
54
50.0
Naga_100235g1
Nannochloropsis gaditana
8.3e-07
56.6
148
26.4
tho293920
Thalassiosira oceanica
8.3e-07
56.6
224
24.1
Naga_100294g10
Nannochloropsis gaditana
1.4e-06
55.8
148
25.7
Naga_100549g4
Nannochloropsis gaditana
1.4e-06
55.8
136
27.2
sya00G191030
Synedra acus
1.8e-06
55.5
54
48.1
Naga_100294g4
Nannochloropsis gaditana
4.1e-06
54.3
131
27.5
tho111660
Thalassiosira oceanica
5.4e-06
53.9
219
23.7
Naga_101065g1
Nannochloropsis gaditana
7.0e-06
53.5
148
25.0
Naga_100497g3
Nannochloropsis gaditana
7.0e-06
53.5
148
25.0
Naga_100252g2
Nannochloropsis gaditana
9.2e-06
53.1
148
25.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (9 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (17 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (11 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (59 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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