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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G168000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G168000
Cyclotella cryptica
2.2e-180
632.9
324
100.0
tho48540
Thalassiosira oceanica
4.9e-18
93.6
133
36.1
CC00G123810
Cyclotella cryptica
2.7e-16
87.8
164
28.0
tho127940
Thalassiosira oceanica
7.8e-16
86.3
197
28.9
AT5G06490
Arabidopsis thaliana
2.7e-08
61.2
117
31.6
AT3G18930
Arabidopsis thaliana
4.6e-08
60.5
61
39.3
AT1G49200
Arabidopsis thaliana
1.7e-07
58.5
67
40.3
AT5G20885
Arabidopsis thaliana
1.7e-07
58.5
95
35.8
Pp3c6_19030
Physcomitrella patens
1.7e-07
58.5
63
39.7
AT2G27940
Arabidopsis thaliana
2.3e-07
58.2
62
37.1
AT5G66070
Arabidopsis thaliana
5.0e-07
57.0
62
41.9
Pp3c5_4170
Physcomitrella patens
6.6e-07
56.6
61
39.3
AT2G17730
Arabidopsis thaliana
8.6e-07
56.2
44
52.3
AT3G18773
Arabidopsis thaliana
8.6e-07
56.2
67
40.3
emh662550
Emiliania huxleyi
8.6e-07
56.2
65
41.5
AT1G49210
Arabidopsis thaliana
1.1e-06
55.8
67
38.8
AT1G49220
Arabidopsis thaliana
1.1e-06
55.8
122
29.5
Pp3c19_14050
Physcomitrella patens
1.5e-06
55.5
57
42.1
Pp3c9_3390
Physcomitrella patens
1.9e-06
55.1
63
38.1
Ec-21_005940
Ectocarpus siliculosus
3.3e-06
54.3
43
44.2
Pp3c22_15440
Physcomitrella patens
3.3e-06
54.3
64
40.6
AT2G35910
Arabidopsis thaliana
4.3e-06
53.9
62
41.9
AT1G74410
Arabidopsis thaliana
5.6e-06
53.5
62
38.7
AT4G35840
Arabidopsis thaliana
5.6e-06
53.5
57
47.4
CC00G16200
Cyclotella cryptica
5.6e-06
53.5
79
34.2
Pp3c22_17730
Physcomitrella patens
5.6e-06
53.5
64
34.4
AT2G17450
Arabidopsis thaliana
7.3e-06
53.1
32
68.8
AT4G35480
Arabidopsis thaliana
7.3e-06
53.1
32
59.4
Pp3c18_5860
Physcomitrella patens
7.3e-06
53.1
61
36.1
ptri179290
Phaeodactylum tricornutum
7.3e-06
53.1
179
29.1
tho55240
Thalassiosira oceanica
7.3e-06
53.1
65
40.0
AT2G28920
Arabidopsis thaliana
9.5e-06
52.8
64
37.5
AT3G10910
Arabidopsis thaliana
9.5e-06
52.8
61
39.3
AT5G47610
Arabidopsis thaliana
9.5e-06
52.8
61
37.7
Pp3c10_8120
Physcomitrella patens
9.5e-06
52.8
60
41.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (18 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing