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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G163140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G163140
Cyclotella cryptica
3.2e-240
832.0
413
100.0
CC00G35370
Cyclotella cryptica
9.5e-160
564.7
425
67.3
CC00G30360
Cyclotella cryptica
1.5e-133
477.6
433
55.9
CC00G141300
Cyclotella cryptica
6.2e-127
455.7
318
76.7
tho56660
Thalassiosira oceanica
2.2e-100
367.5
393
48.9
tho338540
Thalassiosira oceanica
6.5e-100
365.9
393
49.1
tho293920
Thalassiosira oceanica
1.9e-99
364.4
393
48.9
tho111660
Thalassiosira oceanica
3.6e-98
360.1
385
49.4
tho99520
Thalassiosira oceanica
2.0e-88
327.8
352
50.9
tho16720
Thalassiosira oceanica
1.8e-86
321.2
386
45.3
tho83920
Thalassiosira oceanica
3.5e-85
317.0
384
45.3
tho20420
Thalassiosira oceanica
1.9e-83
311.2
383
44.9
CC00G06130
Cyclotella cryptica
8.0e-82
305.8
387
43.9
tho105160
Thalassiosira oceanica
4.4e-80
300.1
395
42.3
tho94400
Thalassiosira oceanica
1.7e-79
298.1
391
43.2
CC00G02330
Cyclotella cryptica
1.6e-77
291.6
390
48.5
CC00G48350
Cyclotella cryptica
3.5e-77
290.4
382
43.5
tho131480
Thalassiosira oceanica
1.0e-76
288.9
381
42.0
tho64380
Thalassiosira oceanica
1.9e-75
284.6
389
41.4
CC00G100660
Cyclotella cryptica
2.1e-74
281.2
337
45.1
tho197380
Thalassiosira oceanica
2.1e-74
281.2
363
42.7
Sro1780_g078321
Seminavis robusta
7.5e-72
272.7
397
40.8
fso06610
Fistulifera solaris
3.7e-71
270.4
395
40.3
fso200830
Fistulifera solaris
4.8e-71
270.0
425
38.6
fso11860
Fistulifera solaris
8.3e-71
269.2
395
40.3
fso11910
Fistulifera solaris
4.8e-63
243.4
400
37.5
sya00G49730
Synedra acus
3.1e-62
240.7
327
42.8
fso121990
Fistulifera solaris
5.5e-59
229.9
400
36.0
fso181140
Fistulifera solaris
5.5e-59
229.9
379
36.1
CC00G83480
Cyclotella cryptica
2.9e-47
191.0
110
82.7
sya00G45490
Synedra acus
1.0e-44
182.6
414
32.1
sya00G236680
Synedra acus
1.0e-44
182.6
414
32.1
tho123740
Thalassiosira oceanica
4.3e-43
177.2
402
31.3
fso174580
Fistulifera solaris
2.3e-41
171.4
324
34.3
fso38500
Fistulifera solaris
3.1e-41
171.0
377
32.6
sya00G229840
Synedra acus
1.5e-40
168.7
388
32.2
tho219020
Thalassiosira oceanica
2.0e-40
168.3
396
30.3
sya00G35570
Synedra acus
2.6e-40
167.9
380
32.4
CC00G123980
Cyclotella cryptica
1.3e-39
165.6
133
60.2
tho78180
Thalassiosira oceanica
4.9e-39
163.7
409
29.6
sya00G247220
Synedra acus
1.2e-37
159.1
396
30.3
tho94380
Thalassiosira oceanica
7.8e-37
156.4
402
28.6
CC00G00700
Cyclotella cryptica
1.1e-33
146.0
383
29.8
CC00G120870
Cyclotella cryptica
1.1e-33
146.0
383
29.8
CC00G161440
Cyclotella cryptica
2.3e-33
144.8
383
28.5
CC00G35440
Cyclotella cryptica
1.2e-32
142.5
375
30.7
fso76400
Fistulifera solaris
4.4e-32
140.6
394
28.2
tho158140
Thalassiosira oceanica
1.1e-30
136.0
379
28.5
tho385140
Thalassiosira oceanica
3.2e-30
134.4
191
39.3
ptri104120
Phaeodactylum tricornutum
1.2e-29
132.5
348
29.0
ptri12390
Phaeodactylum tricornutum
6.0e-29
130.2
366
27.6
CC00G166190
Cyclotella cryptica
3.0e-28
127.9
341
31.4
fso63650
Fistulifera solaris
8.6e-28
126.3
388
28.6
fso95610
Fistulifera solaris
2.5e-27
124.8
314
28.7
tho556840
Thalassiosira oceanica
4.3e-27
124.0
88
64.8
ccr162020
Chondrus crispus
1.6e-26
122.1
374
27.0
ccr162420
Chondrus crispus
2.8e-26
121.3
374
27.0
CC00G170210
Cyclotella cryptica
3.6e-26
120.9
197
36.5
AT4G23160
Arabidopsis thaliana
1.8e-25
118.6
424
25.9
sya00G266280
Synedra acus
6.8e-25
116.7
369
27.1
CC00G152980
Cyclotella cryptica
8.9e-25
116.3
249
33.7
ccr162000
Chondrus crispus
2.0e-24
115.2
378
27.2
tho86000
Thalassiosira oceanica
2.0e-24
115.2
376
25.8
ccr12540
Chondrus crispus
4.4e-24
114.0
360
25.6
tho502580
Thalassiosira oceanica
1.7e-23
112.1
98
53.1
Cre16.g673450
Chlamydomonas reinhardtii
4.9e-23
110.5
386
25.4
ccr12580
Chondrus crispus
1.9e-22
108.6
358
25.7
Cre03.g186800
Chlamydomonas reinhardtii
1.9e-22
108.6
386
25.1
ptri51190
Phaeodactylum tricornutum
9.3e-22
106.3
100
51.0
ccr12560
Chondrus crispus
1.2e-21
105.9
376
24.5
Cre01.g045850
Chlamydomonas reinhardtii
1.6e-21
105.5
386
25.4
sya00G170370
Synedra acus
2.1e-21
105.1
338
24.6
Pp3c23_1320
Physcomitrella patens
4.6e-21
104.0
342
27.8
ccr12600
Chondrus crispus
6.0e-21
103.6
329
27.1
tho408860
Thalassiosira oceanica
1.7e-20
102.1
110
46.4
Naga_100497g3
Nannochloropsis gaditana
3.9e-20
100.9
325
28.6
Naga_101146g2
Nannochloropsis gaditana
1.5e-19
99.0
325
28.0
sya00G153830
Synedra acus
1.5e-19
99.0
193
36.3
CC00G45280
Cyclotella cryptica
9.6e-19
96.3
382
23.8
Naga_100252g2
Nannochloropsis gaditana
9.6e-19
96.3
328
28.0
tho89820
Thalassiosira oceanica
1.3e-18
95.9
199
32.7
Pp3c19_10880
Physcomitrella patens
2.1e-18
95.1
367
24.8
Naga_101065g1
Nannochloropsis gaditana
2.8e-18
94.7
325
27.4
tho488140
Thalassiosira oceanica
3.6e-18
94.4
79
53.2
tho137900
Thalassiosira oceanica
4.8e-18
94.0
84
51.2
Pp3c11_12670
Physcomitrella patens
6.2e-18
93.6
425
25.2
CC00G76150
Cyclotella cryptica
1.1e-17
92.8
135
40.0
CC00G89570
Cyclotella cryptica
1.1e-17
92.8
190
31.6
Pp3c7_15950
Physcomitrella patens
5.3e-17
90.5
352
25.0
Sro418_g138951
Seminavis robusta
6.9e-17
90.1
130
42.3
Naga_101002g3
Nannochloropsis gaditana
4.4e-16
87.4
327
26.9
CC00G37390
Cyclotella cryptica
5.8e-16
87.0
233
32.2
ccr12640
Chondrus crispus
9.9e-16
86.3
142
35.9
Naga_100055g1
Nannochloropsis gaditana
1.3e-15
85.9
329
28.0
CC00G63160
Cyclotella cryptica
4.9e-15
84.0
261
27.6
sya00G239850
Synedra acus
1.9e-14
82.0
183
31.7
Sro114_g056420
Seminavis robusta
2.4e-14
81.6
237
29.1
Sro2023_g311560
Seminavis robusta
3.2e-14
81.3
161
31.7
Pp3c18_3680
Physcomitrella patens
5.4e-14
80.5
144
33.3
Sro2023_g311550
Seminavis robusta
7.1e-14
80.1
139
36.0
sya00G213800
Synedra acus
7.1e-14
80.1
236
30.5
Naga_100433g2
Nannochloropsis gaditana
9.3e-14
79.7
324
27.2
tho668740
Thalassiosira oceanica
9.3e-14
79.7
89
50.6
ptri98580
Phaeodactylum tricornutum
1.6e-13
79.0
129
35.7
sya00G256280
Synedra acus
1.6e-13
79.0
230
30.4
ccr12660
Chondrus crispus
5.1e-12
73.9
371
22.4
Ec-07_000280
Ectocarpus siliculosus
5.1e-12
73.9
392
21.9
ps00G29850
Pseudo-nitzschia multiseries
1.1e-11
72.8
160
30.6
CC00G149300
Cyclotella cryptica
1.5e-11
72.4
145
32.4
Cre03.g183950
Chlamydomonas reinhardtii
1.9e-11
72.0
323
23.2
CC00G17610
Cyclotella cryptica
3.3e-11
71.2
252
26.2
tho31100
Thalassiosira oceanica
9.6e-11
69.7
342
23.1
tho207000
Thalassiosira oceanica
1.3e-10
69.3
395
22.0
CC00G101490
Cyclotella cryptica
2.1e-10
68.6
284
28.2
ptri24690
Phaeodactylum tricornutum
3.6e-10
67.8
101
38.6
sya00G163860
Synedra acus
3.6e-10
67.8
129
32.6
Naga_101948g1
Nannochloropsis gaditana
6.2e-10
67.0
292
25.0
ATMG00820
Arabidopsis thaliana
5.3e-09
63.9
126
29.4
fso163300
Fistulifera solaris
5.3e-09
63.9
327
25.7
tho146100
Thalassiosira oceanica
3.4e-08
61.2
340
22.9
tho269800
Thalassiosira oceanica
3.4e-08
61.2
344
22.4
Naga_100294g11
Nannochloropsis gaditana
4.5e-08
60.8
183
26.8
tho02320
Thalassiosira oceanica
5.8e-08
60.5
341
21.7
tho113620
Thalassiosira oceanica
5.8e-08
60.5
347
23.3
sya00G245830
Synedra acus
9.9e-08
59.7
132
34.1
Naga_100417g4
Nannochloropsis gaditana
2.2e-07
58.5
202
26.7
sya00G185170
Synedra acus
2.9e-07
58.2
250
25.6
tho89800
Thalassiosira oceanica
2.9e-07
58.2
103
32.0
Naga_100533g2
Nannochloropsis gaditana
3.8e-07
57.8
96
33.3
Naga_100336g4
Nannochloropsis gaditana
3.8e-07
57.8
203
26.6
Naga_101449g1
Nannochloropsis gaditana
4.9e-07
57.4
97
33.0
ptri237730
Phaeodactylum tricornutum
6.4e-07
57.0
90
36.7
Naga_103028g1
Nannochloropsis gaditana
8.4e-07
56.6
97
33.0
Pp3c1_13760
Physcomitrella patens
8.4e-07
56.6
254
25.2
ps00G105660
Pseudo-nitzschia multiseries
8.4e-07
56.6
89
40.4
tho633240
Thalassiosira oceanica
8.4e-07
56.6
107
33.6
Naga_101291g1
Nannochloropsis gaditana
1.1e-06
56.2
97
33.0
Pp3c11_9140
Physcomitrella patens
1.1e-06
56.2
341
23.5
Pp3c1_34910
Physcomitrella patens
1.1e-06
56.2
238
23.1
sya00G206120
Synedra acus
1.1e-06
56.2
78
32.1
tho112820
Thalassiosira oceanica
1.1e-06
56.2
108
34.3
tho120340
Thalassiosira oceanica
1.1e-06
56.2
75
38.7
Naga_101142g1
Nannochloropsis gaditana
1.9e-06
55.5
97
33.0
ptri51170
Phaeodactylum tricornutum
2.4e-06
55.1
79
36.7
sya00G103790
Synedra acus
2.4e-06
55.1
132
32.6
tho329240
Thalassiosira oceanica
3.2e-06
54.7
188
28.2
Pp3c26_871
Physcomitrella patens
5.4e-06
53.9
86
25.6
fso79470
Fistulifera solaris
7.1e-06
53.5
156
26.9
fso200820
Fistulifera solaris
9.3e-06
53.1
156
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (7 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (38 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (14 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (25 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (16 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (9 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (17 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing