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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G16000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G16000
Cyclotella cryptica
0.0e+00
3090.1
1556
100.0
tho71040
Thalassiosira oceanica
1.6e-119
433.0
1166
28.8
CC00G117380
Cyclotella cryptica
1.7e-28
130.6
219
35.6
ptri203970
Phaeodactylum tricornutum
4.4e-24
115.9
275
30.5
tps35380
Thalassiosira pseudonana
5.7e-24
115.5
145
40.7
tho286720
Thalassiosira oceanica
9.8e-24
114.8
209
31.1
Sro59_g034250
Seminavis robusta
1.4e-22
110.9
195
29.2
PSNMU-V1.4_AUG-EV-PASAV3_0009330
Pseudo-nitzschia multistriata
9.2e-22
108.2
219
32.0
fso108670
Fistulifera solaris
4.6e-21
105.9
205
32.7
fso50650
Fistulifera solaris
3.9e-20
102.8
259
29.3
ps00G22670
Pseudo-nitzschia multiseries
3.9e-20
102.8
210
31.4
sya00G222300
Synedra acus
1.1e-19
101.3
230
30.4
sya00G106330
Synedra acus
1.5e-19
100.9
230
30.4
tps35400
Thalassiosira pseudonana
4.7e-18
95.9
185
33.5
gene18298
Fragilariopsis cylindrus
9.8e-16
88.2
244
27.9
tho467600
Thalassiosira oceanica
1.1e-14
84.7
126
38.1
ENSG00000122779
Homo sapiens
4.6e-13
79.3
208
27.9
tps148510
Thalassiosira pseudonana
3.0e-12
76.6
99
40.4
Sro1532_g280230
Seminavis robusta
1.6e-10
70.9
352
23.0
Ec-12_001230
Ectocarpus siliculosus
3.1e-09
66.6
114
29.8
sya00G42650
Synedra acus
3.1e-09
66.6
110
31.8
ENSG00000197323
Homo sapiens
4.0e-09
66.2
178
25.3
ENSG00000166436
Homo sapiens
5.2e-09
65.9
259
23.2
FBgn0000541
Drosophila melanogaster
6.8e-09
65.5
178
24.2
ptri165610
Phaeodactylum tricornutum
1.2e-08
64.7
108
31.5
ENSG00000101040
Homo sapiens
2.0e-08
63.9
175
28.0
YGR252W
Saccharomyces cerevisiae strain S288C
2.6e-08
63.5
110
31.8
tho10780
Thalassiosira oceanica
2.6e-08
63.5
115
31.3
FBgn0033155
Drosophila melanogaster
5.8e-08
62.4
95
35.8
CC00G12810
Cyclotella cryptica
1.3e-07
61.2
112
31.2
AT1G20670
Arabidopsis thaliana
1.7e-07
60.8
97
34.0
CM02G00290
Cyanidioschyzon merolae
2.2e-07
60.5
100
33.0
Sro29_g019150
Seminavis robusta
2.2e-07
60.5
108
25.9
CM02G00300
Cyanidioschyzon merolae
2.9e-07
60.1
97
32.0
tho193880
Thalassiosira oceanica
2.9e-07
60.1
118
32.2
sya00G137870
Synedra acus
3.7e-07
59.7
119
29.4
AT1G73150
Arabidopsis thaliana
4.9e-07
59.3
121
31.4
Pp3c21_9250
Physcomitrella patens
4.9e-07
59.3
121
28.9
SPAC1952.05
Schizosaccharomyces pombe
4.9e-07
59.3
108
28.7
Sro581_g170220
Seminavis robusta
6.4e-07
58.9
108
31.5
ENSG00000100425
Homo sapiens
8.3e-07
58.5
98
32.7
PSNMU-V1.4_AUG-EV-PASAV3_0041540
Pseudo-nitzschia multistriata
8.3e-07
58.5
115
29.6
pte251150
Paramecium tetraurelia
8.3e-07
58.5
117
32.5
YDL070W
Saccharomyces cerevisiae strain S288C
8.3e-07
58.5
131
28.2
PSNMU-V1.4_AUG-EV-PASAV3_0024900
Pseudo-nitzschia multistriata
1.1e-06
58.2
112
30.4
AT5G55040
Arabidopsis thaliana
1.4e-06
57.8
105
28.6
Pp3c27_6220
Physcomitrella patens
1.4e-06
57.8
99
28.3
FBgn0023395
Drosophila melanogaster
1.9e-06
57.4
69
40.6
gene8829
Fragilariopsis cylindrus
1.9e-06
57.4
99
30.3
fso77720
Fistulifera solaris
1.9e-06
57.4
79
40.5
fso160930
Fistulifera solaris
1.9e-06
57.4
79
40.5
ENSG00000111642
Homo sapiens
1.9e-06
57.4
52
46.2
Sro1_g000880
Seminavis robusta
1.9e-06
57.4
102
32.4
AT5G44800
Arabidopsis thaliana
2.4e-06
57.0
129
31.8
WBGene00004204
Caenorhabditis elegans
2.4e-06
57.0
90
30.0
CC00G140040
Cyclotella cryptica
2.4e-06
57.0
78
39.7
FBgn0262519
Drosophila melanogaster
2.4e-06
57.0
58
37.9
Pp3c18_15420
Physcomitrella patens
2.4e-06
57.0
151
25.8
Pp3c4_5410
Physcomitrella patens
2.4e-06
57.0
95
36.8
Pp3c5_1040
Physcomitrella patens
2.4e-06
57.0
100
28.0
Sro108_g054350
Seminavis robusta
2.4e-06
57.0
105
31.4
fso197600
Fistulifera solaris
3.2e-06
56.6
116
28.4
ENSG00000116254
Homo sapiens
3.2e-06
56.6
52
46.2
ENSG00000170004
Homo sapiens
3.2e-06
56.6
52
44.2
ps00G132770
Pseudo-nitzschia multiseries
3.2e-06
56.6
112
29.5
tps211960
Thalassiosira pseudonana
3.2e-06
56.6
101
31.7
fso68830
Fistulifera solaris
4.1e-06
56.2
116
28.4
ENSG00000123636
Homo sapiens
4.1e-06
56.2
109
31.2
ENSG00000096070
Homo sapiens
4.1e-06
56.2
96
33.3
Naga_100489g1
Nannochloropsis gaditana
4.1e-06
56.2
114
28.9
sya00G01160
Synedra acus
5.4e-06
55.8
117
27.4
sya00G15230
Synedra acus
5.4e-06
55.8
147
26.5
gene14639
Fragilariopsis cylindrus
7.1e-06
55.5
169
24.9
Pp3c12_14300
Physcomitrella patens
7.1e-06
55.5
84
40.5
ps00G10340
Pseudo-nitzschia multiseries
7.1e-06
55.5
109
30.3
pte383140
Paramecium tetraurelia
7.1e-06
55.5
118
28.8
Sro906_g218670
Seminavis robusta
7.1e-06
55.5
179
25.7
tps203630
Thalassiosira pseudonana
7.1e-06
55.5
155
27.1
AT1G76380
Arabidopsis thaliana
9.2e-06
55.1
144
28.5
AT3G01770
Arabidopsis thaliana
9.2e-06
55.1
105
31.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (7 genes)
Synedra acus (6 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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