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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G159510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G159510
Cyclotella cryptica
2.4e-120
433.0
233
100.0
tps208450
Thalassiosira pseudonana
7.7e-82
305.1
208
79.8
tho290880
Thalassiosira oceanica
3.7e-76
286.2
209
73.7
sya00G66650
Synedra acus
2.6e-58
226.9
195
60.5
sya00G66660
Synedra acus
2.6e-58
226.9
195
60.5
ptri180750
Phaeodactylum tricornutum
7.2e-48
192.2
182
55.5
ps00G01800
Pseudo-nitzschia multiseries
1.6e-47
191.0
210
51.9
gene14016
Fragilariopsis cylindrus
3.6e-47
189.9
217
49.8
fso25330
Fistulifera solaris
3.6e-47
189.9
190
53.2
fso116180
Fistulifera solaris
3.6e-47
189.9
190
53.2
Sro1247_g255840
Seminavis robusta
1.3e-44
181.4
197
49.7
tho603300
Thalassiosira oceanica
5.9e-42
172.6
136
68.4
ENSG00000241837
Homo sapiens
8.9e-30
132.1
182
39.0
FBgn0016691
Drosophila melanogaster
4.6e-26
119.8
192
35.4
SPCC1840.06
Schizosaccharomyces pombe
3.0e-25
117.1
197
37.6
Pp3c21_13430
Physcomitrella patens
1.2e-23
111.7
176
33.5
Pp3c21_15430
Physcomitrella patens
2.3e-22
107.5
203
30.0
WBGene00000230
Caenorhabditis elegans
2.0e-21
104.4
218
31.2
AT5G13450
Arabidopsis thaliana
1.4e-19
98.2
212
28.8
Pp3c11_16260
Physcomitrella patens
1.2e-18
95.1
180
30.6
pte150650
Paramecium tetraurelia
2.3e-17
90.9
184
31.0
pte347800
Paramecium tetraurelia
1.1e-16
88.6
184
30.4
pte391730
Paramecium tetraurelia
1.1e-16
88.6
184
30.4
AA0011G01800
Aureococcus anophagefferens
1.9e-16
87.8
191
28.8
ENSG00000249209
Homo sapiens
1.2e-15
85.1
119
42.0
YDR298C
Saccharomyces cerevisiae strain S288C
1.6e-15
84.7
198
27.8
pte120150
Paramecium tetraurelia
2.8e-15
84.0
184
29.3
CM05G01980
Cyanidioschyzon merolae
1.1e-14
82.0
175
30.9
CM07G00040
Cyanidioschyzon merolae
1.1e-14
82.0
175
30.9
Cre16.g680000
Chlamydomonas reinhardtii
6.8e-14
79.3
180
28.3
emh315740
Emiliania huxleyi
6.8e-14
79.3
177
28.8
sya00G268780
Synedra acus
5.8e-13
76.3
167
28.1
ccr147380
Chondrus crispus
9.9e-13
75.5
175
26.3
sya00G10830
Synedra acus
1.7e-12
74.7
176
30.7
gsu_chlor00G01060
Galdieria sulphuraria
2.3e-09
64.3
170
25.9
AACG00310
Aureococcus anophagefferens
5.6e-08
59.7
169
24.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing