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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G156140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G156140
Cyclotella cryptica
0.0e+00
1532.3
771
100.0
tps86830
Thalassiosira pseudonana
2.5e-145
517.7
781
42.9
tho208160
Thalassiosira oceanica
5.2e-111
403.7
708
39.0
fso172770
Fistulifera solaris
6.7e-66
253.8
445
38.7
fso105490
Fistulifera solaris
9.7e-65
250.0
442
39.4
Sro810_g205700
Seminavis robusta
6.9e-63
243.8
546
33.2
PSNMU-V1.4_AUG-EV-PASAV3_0070980
Pseudo-nitzschia multistriata
2.7e-59
231.9
512
34.6
ptri144970
Phaeodactylum tricornutum
2.6e-54
215.3
402
34.8
gene20389
Fragilariopsis cylindrus
6.5e-53
210.7
388
38.7
sya00G197880
Synedra acus
4.2e-52
208.0
344
38.4
ps00G105850
Pseudo-nitzschia multiseries
2.6e-49
198.7
400
37.2
Naga_100012g79
Nannochloropsis gaditana
4.5e-22
108.2
420
26.9
tho507020
Thalassiosira oceanica
1.9e-20
102.8
227
33.5
YHL010C
Saccharomyces cerevisiae strain S288C
1.6e-19
99.8
223
30.0
Cre10.g454400
Chlamydomonas reinhardtii
2.4e-15
85.9
69
50.7
AA0005G04030
Aureococcus anophagefferens
4.1e-15
85.1
106
36.8
ENSG00000089234
Homo sapiens
5.4e-15
84.7
61
49.2
CM11G03070
Cyanidioschyzon merolae
4.6e-14
81.6
161
30.4
Ec-07_005920
Ectocarpus siliculosus
5.9e-14
81.3
320
24.7
Pp3c20_19210
Physcomitrella patens
1.0e-13
80.5
60
51.7
AT2G26000
Arabidopsis thaliana
3.0e-13
79.0
310
25.5
gsu57070
Galdieria sulphuraria
3.0e-13
79.0
134
32.1
gsu57090
Galdieria sulphuraria
3.0e-13
79.0
134
32.1
FBgn0038686
Drosophila melanogaster
3.9e-13
78.6
60
51.7
SPAC16E8.13
Schizosaccharomyces pombe
6.6e-13
77.8
61
47.5
Naga_100433g6
Nannochloropsis gaditana
1.5e-12
76.6
60
46.7
WBGene00017144
Caenorhabditis elegans
6.8e-10
67.8
291
22.0
emh06020
Emiliania huxleyi
1.7e-08
63.2
52
46.2
fso176720
Fistulifera solaris
1.1e-07
60.5
77
33.8
ENSG00000094631
Homo sapiens
1.4e-07
60.1
65
40.0
ccr14020
Chondrus crispus
1.9e-07
59.7
76
35.5
pte89320
Paramecium tetraurelia
3.2e-07
58.9
92
31.5
AT2G42160
Arabidopsis thaliana
5.4e-07
58.2
160
27.5
sya00G160650
Synedra acus
9.2e-07
57.4
64
40.6
fso112110
Fistulifera solaris
1.2e-06
57.0
81
30.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing