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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G149660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G149660
Cyclotella cryptica
0.0e+00
2071.6
1063
100.0
CC00G125740
Cyclotella cryptica
6.7e-213
742.7
575
61.9
CC00G97690
Cyclotella cryptica
6.6e-136
486.9
296
80.7
tps142420
Thalassiosira pseudonana
1.1e-125
453.0
299
73.2
ptri69840
Phaeodactylum tricornutum
9.9e-124
446.4
347
62.0
fso199510
Fistulifera solaris
3.8e-123
444.5
328
66.2
fso73640
Fistulifera solaris
2.1e-121
438.7
329
65.3
Sro70_g039030
Seminavis robusta
3.3e-119
431.4
332
60.5
ptri72160
Phaeodactylum tricornutum
1.1e-114
416.4
360
55.8
gene18213
Fragilariopsis cylindrus
6.2e-110
400.6
325
56.9
sya00G196410
Synedra acus
3.1e-109
398.3
324
55.9
fso43770
Fistulifera solaris
4.5e-108
394.4
351
56.7
Sro695_g188680
Seminavis robusta
7.6e-108
393.7
329
59.9
fso64760
Fistulifera solaris
1.3e-107
392.9
351
56.4
ps00G65070
Pseudo-nitzschia multiseries
6.4e-107
390.6
324
57.1
tps193950
Thalassiosira pseudonana
2.9e-99
365.2
299
59.5
CC00G122160
Cyclotella cryptica
2.8e-94
348.6
245
68.2
sya00G161050
Synedra acus
1.3e-78
296.6
331
42.3
fso77080
Fistulifera solaris
6.3e-78
294.3
309
43.7
ps00G33510
Pseudo-nitzschia multiseries
2.6e-76
288.9
328
40.2
Sro968_g226070
Seminavis robusta
2.6e-76
288.9
307
43.3
Sro99_g050950
Seminavis robusta
2.6e-76
288.9
311
42.8
ptri130290
Phaeodactylum tricornutum
4.5e-76
288.1
330
40.9
tps130000
Thalassiosira pseudonana
4.5e-76
288.1
300
43.3
gene16313
Fragilariopsis cylindrus
5.9e-76
287.7
328
40.5
CC00G54970
Cyclotella cryptica
1.0e-75
287.0
230
60.0
fso77050
Fistulifera solaris
1.3e-75
286.6
316
44.3
fso191720
Fistulifera solaris
1.7e-75
286.2
316
44.3
fso160310
Fistulifera solaris
1.1e-74
283.5
309
42.7
sya00G00440
Synedra acus
2.1e-73
279.3
172
70.9
tho217020
Thalassiosira oceanica
2.4e-69
265.8
298
43.0
tho90940
Thalassiosira oceanica
5.9e-60
234.6
526
30.8
tho328140
Thalassiosira oceanica
2.7e-49
199.1
343
36.7
CC00G178770
Cyclotella cryptica
3.6e-49
198.7
115
86.1
tho499480
Thalassiosira oceanica
4.4e-47
191.8
254
40.6
tho91280
Thalassiosira oceanica
7.5e-47
191.0
342
33.9
Sro9_g007140
Seminavis robusta
3.7e-46
188.7
146
56.2
CC00G189120
Cyclotella cryptica
5.9e-44
181.4
134
65.7
FBgn0031816
Drosophila melanogaster
3.0e-40
169.1
308
32.5
CC00G108760
Cyclotella cryptica
2.0e-39
166.4
142
57.7
tho435360
Thalassiosira oceanica
2.0e-39
166.4
251
39.8
CC00G69060
Cyclotella cryptica
5.7e-39
164.9
207
37.7
ENSG00000163743
Homo sapiens
2.2e-38
162.9
214
36.0
Cre05.g248550
Chlamydomonas reinhardtii
8.6e-35
151.0
305
32.8
CC00G157480
Cyclotella cryptica
6.1e-33
144.8
136
56.6
CC00G184530
Cyclotella cryptica
6.1e-33
144.8
136
56.6
CC00G204860
Cyclotella cryptica
6.1e-33
144.8
136
56.6
AT3G62970
Arabidopsis thaliana
4.9e-30
135.2
298
30.9
tps146910
Thalassiosira pseudonana
1.1e-29
134.0
232
31.9
CM13G01410
Cyanidioschyzon merolae
1.4e-29
133.7
302
30.1
AT1G18910
Arabidopsis thaliana
3.2e-29
132.5
301
28.9
CC00G86210
Cyclotella cryptica
5.4e-29
131.7
317
27.8
AT1G74770
Arabidopsis thaliana
2.0e-28
129.8
302
27.2
AT3G18290
Arabidopsis thaliana
3.5e-28
129.0
329
26.7
fso155640
Fistulifera solaris
5.9e-28
128.3
316
27.2
Ec-26_004520
Ectocarpus siliculosus
1.3e-27
127.1
345
29.9
Cre17.g718300
Chlamydomonas reinhardtii
2.3e-27
126.3
299
30.8
Pp3c6_1960
Physcomitrella patens
2.5e-26
122.9
300
30.0
Pp3c14_5600
Physcomitrella patens
4.3e-26
122.1
303
29.7
Pp3c2_31820
Physcomitrella patens
7.3e-26
121.3
321
29.9
Pp3c25_14501
Physcomitrella patens
9.5e-26
120.9
302
30.1
Pp3c25_14500
Physcomitrella patens
9.5e-26
120.9
302
30.1
Pp3c1_6070
Physcomitrella patens
9.5e-26
120.9
299
29.4
SPAC2F3.16
Schizosaccharomyces pombe
2.1e-25
119.8
305
28.5
Naga_100090g9
Nannochloropsis gaditana
2.8e-25
119.4
308
25.6
tho432980
Thalassiosira oceanica
6.2e-25
118.2
265
33.6
ccr36960
Chondrus crispus
1.4e-24
117.1
326
29.4
ccr65580
Chondrus crispus
3.1e-24
115.9
306
25.5
AT5G18650
Arabidopsis thaliana
4.0e-24
115.5
299
29.4
pte243060
Paramecium tetraurelia
4.0e-24
115.5
304
28.3
AT5G22920
Arabidopsis thaliana
5.2e-24
115.2
299
29.4
ccr161060
Chondrus crispus
6.8e-24
114.8
311
27.0
Pp3c11_6970
Physcomitrella patens
6.8e-24
114.8
316
27.8
ps00G05920
Pseudo-nitzschia multiseries
1.2e-23
114.0
304
28.6
Pp3c10_4820
Physcomitrella patens
2.0e-23
113.2
302
27.8
tho537120
Thalassiosira oceanica
1.3e-22
110.5
368
26.4
AT5G25560
Arabidopsis thaliana
3.5e-20
102.4
269
30.1
gsu76240
Galdieria sulphuraria
6.0e-20
101.7
307
26.1
pte443830
Paramecium tetraurelia
1.7e-19
100.1
305
27.2
pte760660
Paramecium tetraurelia
1.1e-18
97.4
317
26.5
gene11141
Fragilariopsis cylindrus
2.8e-17
92.8
174
34.5
Sro9_g007130
Seminavis robusta
3.2e-13
79.3
46
60.9
sya00G147320
Synedra acus
1.6e-12
77.0
346
23.7
tho288820
Thalassiosira oceanica
1.6e-12
77.0
77
46.8
CC00G85450
Cyclotella cryptica
1.3e-11
73.9
46
63.0
ccr90400
Chondrus crispus
6.2e-09
65.1
225
25.8
ccr159880
Chondrus crispus
1.4e-08
63.9
225
25.8
tho558360
Thalassiosira oceanica
5.2e-08
62.0
125
30.4
gene9040
Fragilariopsis cylindrus
1.5e-07
60.5
324
21.3
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
1.5e-07
60.5
56
46.4
tho606960
Thalassiosira oceanica
2.0e-07
60.1
121
33.9
Sro1974_g308730
Seminavis robusta
3.4e-07
59.3
157
29.3
ccr143140
Chondrus crispus
6.4e-06
55.1
83
34.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (11 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (14 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (6 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing