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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G149290
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G149290
Cyclotella cryptica
0.0e+00
2341.6
1237
100.0
CC00G130110
Cyclotella cryptica
2.3e-254
880.6
570
86.7
CC00G130120
Cyclotella cryptica
9.6e-216
752.3
405
92.1
CC00G14540
Cyclotella cryptica
5.1e-116
421.0
472
48.9
CC00G56840
Cyclotella cryptica
1.1e-99
366.7
196
93.4
CC00G29900
Cyclotella cryptica
2.2e-87
325.9
300
54.7
fso139430
Fistulifera solaris
3.6e-77
292.0
612
32.0
fso135820
Fistulifera solaris
8.8e-76
287.3
494
34.0
CC00G205650
Cyclotella cryptica
1.1e-75
287.0
354
46.3
fso41800
Fistulifera solaris
2.8e-74
282.3
693
30.0
CC00G189460
Cyclotella cryptica
4.1e-73
278.5
176
80.1
tho02180
Thalassiosira oceanica
3.6e-69
265.4
490
33.1
tho238620
Thalassiosira oceanica
6.3e-66
254.6
626
29.2
tho75920
Thalassiosira oceanica
1.4e-65
253.4
635
28.0
tho282040
Thalassiosira oceanica
2.4e-65
252.7
703
28.2
CC00G100580
Cyclotella cryptica
3.8e-63
245.4
354
43.2
tho22460
Thalassiosira oceanica
5.0e-63
245.0
622
29.1
CC00G85540
Cyclotella cryptica
4.2e-62
241.9
623
29.2
CC00G31390
Cyclotella cryptica
2.1e-61
239.6
200
60.0
tho172560
Thalassiosira oceanica
3.0e-60
235.7
621
27.2
CC00G91810
Cyclotella cryptica
8.8e-60
234.2
665
27.7
CC00G09940
Cyclotella cryptica
1.5e-59
233.4
253
49.8
tho306680
Thalassiosira oceanica
7.0e-57
224.6
654
26.5
CC00G83450
Cyclotella cryptica
7.7e-56
221.1
214
77.1
fso119570
Fistulifera solaris
3.2e-54
215.7
622
27.8
SPBC1E8.04
Schizosaccharomyces pombe
9.1e-49
197.6
446
27.8
SPAC9.04
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAC167.08
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAC2E1P3.03c
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAC26A3.13c
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAPB15E9.03c
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAC27E2.08
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPBC9B6.02c
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPCC1020.14
Schizosaccharomyces pombe
2.0e-48
196.4
446
27.8
SPAC13D1.01c
Schizosaccharomyces pombe
7.7e-48
194.5
446
27.6
SPAC19D5.09c
Schizosaccharomyces pombe
7.7e-48
194.5
446
27.6
SPBC1289.17
Schizosaccharomyces pombe
7.7e-48
194.5
446
27.6
SPCC1494.11c
Schizosaccharomyces pombe
1.9e-46
189.9
446
27.6
CC00G173050
Cyclotella cryptica
2.3e-44
183.0
350
34.6
CC00G91500
Cyclotella cryptica
4.5e-40
168.7
294
33.0
YIL082W-A
Saccharomyces cerevisiae strain S288C
4.5e-40
168.7
383
30.5
YGR109W-B
Saccharomyces cerevisiae strain S288C
2.3e-39
166.4
383
30.3
CC00G56120
Cyclotella cryptica
8.6e-39
164.5
279
35.1
sya00G116530
Synedra acus
1.5e-38
163.7
293
31.4
tho171300
Thalassiosira oceanica
7.3e-38
161.4
330
32.7
CC00G174280
Cyclotella cryptica
1.8e-36
156.8
269
35.7
CC00G132210
Cyclotella cryptica
2.3e-36
156.4
284
32.4
CC00G84920
Cyclotella cryptica
2.0e-32
143.3
180
44.4
sya00G92600
Synedra acus
2.7e-32
142.9
306
28.1
Cre05.g235400
Chlamydomonas reinhardtii
4.6e-32
142.1
382
26.2
CC00G36600
Cyclotella cryptica
1.7e-31
140.2
261
32.2
CC00G98340
Cyclotella cryptica
1.7e-31
140.2
86
79.1
Cre09.g398141
Chlamydomonas reinhardtii
8.6e-31
137.9
382
26.4
sya00G186240
Synedra acus
1.9e-30
136.7
270
30.7
CC00G93070
Cyclotella cryptica
3.3e-30
136.0
216
34.3
CC00G52640
Cyclotella cryptica
4.3e-30
135.6
432
26.9
tho351940
Thalassiosira oceanica
1.6e-29
133.7
293
32.1
tho85500
Thalassiosira oceanica
3.6e-29
132.5
277
30.7
tho218240
Thalassiosira oceanica
3.6e-29
132.5
277
30.7
CC00G03460
Cyclotella cryptica
1.4e-28
130.6
235
33.2
ccr126240
Chondrus crispus
2.0e-27
126.7
368
24.5
Pp3c17_2370
Physcomitrella patens
3.4e-27
125.9
339
25.7
tho371160
Thalassiosira oceanica
7.0e-25
118.2
204
34.8
CC00G92010
Cyclotella cryptica
1.2e-24
117.5
86
65.1
CC00G184730
Cyclotella cryptica
1.2e-24
117.5
182
36.3
CC00G77420
Cyclotella cryptica
2.7e-24
116.3
134
45.5
CC00G166500
Cyclotella cryptica
7.8e-24
114.8
217
31.8
CC00G194010
Cyclotella cryptica
1.3e-23
114.0
361
26.6
Cre10.g423050
Chlamydomonas reinhardtii
1.7e-23
113.6
328
26.5
tho154460
Thalassiosira oceanica
3.9e-23
112.5
391
22.8
CC00G160930
Cyclotella cryptica
5.6e-22
108.6
212
32.1
sya00G153710
Synedra acus
9.5e-22
107.8
178
32.6
CC00G184160
Cyclotella cryptica
1.4e-20
104.0
219
32.4
CC00G51190
Cyclotella cryptica
2.0e-19
100.1
233
29.6
ccr33180
Chondrus crispus
1.7e-18
97.1
452
21.2
CC00G145690
Cyclotella cryptica
5.4e-17
92.0
291
27.5
Pp3c14_25520
Physcomitrella patens
7.8e-16
88.2
282
24.5
sya00G229820
Synedra acus
1.3e-15
87.4
236
27.1
sya00G80090
Synedra acus
2.3e-15
86.7
122
38.5
tho171280
Thalassiosira oceanica
6.6e-15
85.1
345
22.3
CC00G204630
Cyclotella cryptica
2.5e-14
83.2
236
31.4
sya00G74980
Synedra acus
2.5e-14
83.2
237
27.0
tho159140
Thalassiosira oceanica
3.3e-14
82.8
220
30.9
tho640940
Thalassiosira oceanica
3.3e-14
82.8
138
32.6
sya00G19150
Synedra acus
4.3e-14
82.4
172
29.7
sya00G221990
Synedra acus
4.3e-14
82.4
111
39.6
sya00G233680
Synedra acus
3.6e-13
79.3
237
25.7
CC00G08120
Cyclotella cryptica
6.2e-13
78.6
198
30.8
Sro301_g111841
Seminavis robusta
1.1e-12
77.8
164
28.0
sya00G82110
Synedra acus
4.0e-12
75.9
234
26.1
ccr101580
Chondrus crispus
5.2e-12
75.5
202
25.2
CC00G29890
Cyclotella cryptica
5.2e-12
75.5
78
44.9
CC00G72280
Cyclotella cryptica
5.2e-12
75.5
268
27.2
sya00G138750
Synedra acus
5.2e-12
75.5
234
25.2
CC00G32630
Cyclotella cryptica
8.9e-12
74.7
86
48.8
tho261040
Thalassiosira oceanica
8.9e-12
74.7
85
38.8
CC00G07440
Cyclotella cryptica
2.0e-11
73.6
159
30.2
tho150880
Thalassiosira oceanica
4.4e-11
72.4
198
28.8
CC00G68440
Cyclotella cryptica
1.7e-10
70.5
136
35.3
sya00G180710
Synedra acus
1.7e-10
70.5
227
25.1
sya00G196730
Synedra acus
1.7e-10
70.5
246
24.4
sya00G83030
Synedra acus
2.9e-10
69.7
237
24.5
CC00G175470
Cyclotella cryptica
4.9e-10
68.9
122
35.2
sya00G63280
Synedra acus
4.9e-10
68.9
179
25.7
sya00G265580
Synedra acus
4.9e-10
68.9
238
23.1
tho500920
Thalassiosira oceanica
1.1e-09
67.8
74
39.2
sya00G244450
Synedra acus
1.4e-09
67.4
222
24.8
sya00G43270
Synedra acus
2.4e-09
66.6
143
28.7
CC00G11730
Cyclotella cryptica
7.1e-09
65.1
138
31.2
sya00G108070
Synedra acus
7.1e-09
65.1
111
31.5
sya00G241540
Synedra acus
1.2e-08
64.3
149
30.2
sya00G70740
Synedra acus
1.6e-08
63.9
179
25.7
sya00G12390
Synedra acus
4.6e-08
62.4
178
24.7
sya00G163840
Synedra acus
4.6e-08
62.4
236
21.2
Sro808_g205470
Seminavis robusta
6.0e-08
62.0
96
35.4
sya00G06940
Synedra acus
6.0e-08
62.0
173
27.2
sya00G221860
Synedra acus
6.0e-08
62.0
146
27.4
ccr116440
Chondrus crispus
7.8e-08
61.6
271
19.9
sya00G04310
Synedra acus
7.8e-08
61.6
105
34.3
sya00G114110
Synedra acus
7.8e-08
61.6
110
33.6
tho159120
Thalassiosira oceanica
7.8e-08
61.6
77
36.4
sya00G81130
Synedra acus
1.7e-07
60.5
152
26.3
tho117420
Thalassiosira oceanica
1.7e-07
60.5
259
21.6
sya00G53470
Synedra acus
3.9e-07
59.3
139
28.8
sya00G99960
Synedra acus
3.9e-07
59.3
166
24.7
sya00G153780
Synedra acus
3.9e-07
59.3
93
32.3
ccr13900
Chondrus crispus
5.1e-07
58.9
107
29.0
Cre11.g467733
Chlamydomonas reinhardtii
5.1e-07
58.9
71
35.2
sya00G83760
Synedra acus
6.6e-07
58.5
213
23.9
CC00G114420
Cyclotella cryptica
8.7e-07
58.2
262
25.6
CC00G69640
Cyclotella cryptica
1.1e-06
57.8
154
30.5
sya00G89850
Synedra acus
1.1e-06
57.8
256
23.4
sya00G10400
Synedra acus
1.5e-06
57.4
93
32.3
sya00G142450
Synedra acus
1.9e-06
57.0
122
31.1
CC00G171380
Cyclotella cryptica
2.5e-06
56.6
61
45.9
ps00G62570
Pseudo-nitzschia multiseries
2.5e-06
56.6
82
31.7
CC00G132290
Cyclotella cryptica
7.3e-06
55.1
193
26.4
CC00G155220
Cyclotella cryptica
9.6e-06
54.7
95
38.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (21 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (48 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (13 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (36 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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