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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G148530
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G148530
Cyclotella cryptica
3.4e-200
698.7
336
100.0
CC00G47840
Cyclotella cryptica
6.9e-116
418.7
306
64.4
CC00G75400
Cyclotella cryptica
6.9e-116
418.7
306
64.4
tho139880
Thalassiosira oceanica
3.9e-103
376.3
329
54.7
tho158000
Thalassiosira oceanica
3.9e-103
376.3
329
54.7
CC00G07980
Cyclotella cryptica
3.6e-101
369.8
327
54.1
CC00G159220
Cyclotella cryptica
1.1e-100
368.2
327
54.1
CC00G68530
Cyclotella cryptica
3.1e-100
366.7
325
55.1
CC00G139380
Cyclotella cryptica
3.1e-100
366.7
327
53.8
tho163240
Thalassiosira oceanica
5.3e-100
365.9
330
54.8
CC00G92410
Cyclotella cryptica
4.5e-99
362.8
325
52.3
tho418560
Thalassiosira oceanica
4.5e-99
362.8
328
53.7
tho01120
Thalassiosira oceanica
1.1e-97
358.2
329
53.2
tho59300
Thalassiosira oceanica
1.0e-95
351.7
327
52.9
tho26600
Thalassiosira oceanica
2.3e-95
350.5
329
51.1
CC00G118720
Cyclotella cryptica
1.9e-94
347.4
337
51.3
CC00G210670
Cyclotella cryptica
1.3e-79
298.1
261
54.0
CC00G151980
Cyclotella cryptica
1.4e-68
261.5
206
57.8
PSNMU-V1.4_AUG-EV-PASAV3_0089660
Pseudo-nitzschia multistriata
6.5e-58
226.1
323
39.6
PSNMU-V1.4_AUG-EV-PASAV3_0022040
Pseudo-nitzschia multistriata
1.3e-53
211.8
329
35.6
fso12240
Fistulifera solaris
3.4e-46
187.2
315
35.2
CC00G62800
Cyclotella cryptica
5.9e-43
176.4
199
44.2
CC00G38470
Cyclotella cryptica
6.5e-42
172.9
181
48.6
CC00G56080
Cyclotella cryptica
1.0e-39
165.6
101
71.3
PSNMU-V1.4_AUG-EV-PASAV3_0020960
Pseudo-nitzschia multistriata
1.7e-37
158.3
251
36.3
CC00G56090
Cyclotella cryptica
5.2e-23
110.2
109
45.9
ps00G140070
Pseudo-nitzschia multiseries
2.3e-18
94.7
340
25.6
CC00G177010
Cyclotella cryptica
1.3e-13
79.0
62
53.2
ps00G11210
Pseudo-nitzschia multiseries
2.9e-13
77.8
98
38.8
ccr162020
Chondrus crispus
6.4e-13
76.6
305
25.6
ccr162000
Chondrus crispus
1.4e-12
75.5
304
24.0
ps00G134200
Pseudo-nitzschia multiseries
2.1e-11
71.6
246
27.2
ccr162420
Chondrus crispus
2.7e-11
71.2
305
23.9
ccr12660
Chondrus crispus
3.0e-10
67.8
305
24.9
ps00G74410
Pseudo-nitzschia multiseries
3.9e-10
67.4
95
32.6
Naga_101065g1
Nannochloropsis gaditana
3.3e-09
64.3
297
22.6
Naga_101146g2
Nannochloropsis gaditana
2.1e-08
61.6
297
22.9
Naga_100055g1
Nannochloropsis gaditana
3.6e-08
60.8
297
22.6
Naga_100497g3
Nannochloropsis gaditana
6.2e-08
60.1
295
22.7
Naga_101002g3
Nannochloropsis gaditana
2.4e-07
58.2
307
21.5
ps00G160950
Pseudo-nitzschia multiseries
5.8e-06
53.5
105
30.5
ccr12580
Chondrus crispus
7.6e-06
53.1
70
38.6
ccr12600
Chondrus crispus
7.6e-06
53.1
70
38.6
ccr52380
Chondrus crispus
7.6e-06
53.1
70
38.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (7 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (16 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (7 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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