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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G138070
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G138070
Cyclotella cryptica
5.7e-312
1070.8
572
100.0
tps90360
Thalassiosira pseudonana
1.7e-159
564.3
560
54.6
tho09020
Thalassiosira oceanica
1.3e-122
441.8
563
45.8
ps00G04660
Pseudo-nitzschia multiseries
3.3e-70
267.7
573
33.0
gene3270
Fragilariopsis cylindrus
9.7e-70
266.2
577
34.0
gene17516
Fragilariopsis cylindrus
1.7e-66
255.4
556
33.5
Sro777_g201000
Seminavis robusta
7.2e-65
250.0
591
33.8
fso29440
Fistulifera solaris
2.8e-53
211.5
560
31.4
fso120730
Fistulifera solaris
1.1e-52
209.5
553
32.0
sya00G55890
Synedra acus
9.4e-49
196.4
562
30.4
PSNMU-V1.4_AUG-EV-PASAV3_0100040
Pseudo-nitzschia multistriata
8.8e-47
189.9
269
42.0
ptri203410
Phaeodactylum tricornutum
1.2e-24
116.3
261
32.2
ptri203370
Phaeodactylum tricornutum
4.9e-21
104.4
102
52.0
Naga_100065g15
Nannochloropsis gaditana
4.4e-14
81.3
383
27.4
Ec-21_002710
Ectocarpus siliculosus
1.2e-08
63.2
68
50.0
tho616020
Thalassiosira oceanica
9.9e-06
53.5
39
53.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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