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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G136170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G136170
Cyclotella cryptica
9.6e-190
664.1
344
100.0
tps01620
Thalassiosira pseudonana
1.5e-97
357.8
307
63.8
sya00G175040
Synedra acus
2.5e-41
171.0
239
43.1
sya00G121350
Synedra acus
4.3e-41
170.2
239
43.1
Naga_100078g18
Nannochloropsis gaditana
1.0e-21
105.9
191
37.2
Ec-11_004910
Ectocarpus siliculosus
3.0e-18
94.4
194
32.5
Pp3c24_19790
Physcomitrella patens
2.0e-17
91.7
184
31.0
PSNMU-V1.4_AUG-EV-PASAV3_0055990
Pseudo-nitzschia multistriata
5.7e-17
90.1
211
33.6
FBgn0261976
Drosophila melanogaster
1.7e-16
88.6
148
32.4
Sro137_g064300
Seminavis robusta
2.2e-16
88.2
206
31.1
AT3G12530
Arabidopsis thaliana
1.8e-15
85.1
213
28.6
Sro286_g108210
Seminavis robusta
7.0e-15
83.2
210
31.0
gene14924
Fragilariopsis cylindrus
9.1e-15
82.8
219
30.6
ps00G116530
Pseudo-nitzschia multiseries
3.5e-14
80.9
211
30.8
WBGene00009287
Caenorhabditis elegans
4.5e-14
80.5
140
32.1
ENSG00000131153
Homo sapiens
5.9e-14
80.1
203
28.1
CM17G03810
Cyanidioschyzon merolae
1.3e-13
79.0
201
29.9
gsu37370
Galdieria sulphuraria
1.9e-12
75.1
180
27.8
ptri18550
Phaeodactylum tricornutum
3.2e-12
74.3
244
27.5
Cre01.g029100
Chlamydomonas reinhardtii
2.7e-11
71.2
204
28.9
pte568630
Paramecium tetraurelia
8.0e-11
69.7
171
29.8
pte567670
Paramecium tetraurelia
1.0e-10
69.3
165
32.1
SPBC725.13c
Schizosaccharomyces pombe
1.8e-10
68.6
180
28.9
ccr74740
Chondrus crispus
5.7e-09
63.5
143
29.4
fso91870
Fistulifera solaris
1.3e-08
62.4
189
27.0
fso36410
Fistulifera solaris
4.1e-07
57.4
207
25.6
ccr74220
Chondrus crispus
1.2e-06
55.8
120
27.5
emh651300
Emiliania huxleyi
7.7e-06
53.1
150
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing