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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G135150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G60270
Cyclotella cryptica
0.0e+00
1123.2
557
100.0
CC00G135150
Cyclotella cryptica
0.0e+00
1123.2
557
100.0
tps122870
Thalassiosira pseudonana
1.5e-184
647.5
405
78.3
sya00G103910
Synedra acus
3.6e-154
546.6
541
53.4
Sro1830_g300310
Seminavis robusta
4.9e-143
509.6
561
49.6
ptri15010
Phaeodactylum tricornutum
1.0e-140
501.9
520
51.9
fso66600
Fistulifera solaris
1.7e-140
501.1
567
49.4
fso174830
Fistulifera solaris
3.3e-139
496.9
481
53.8
Ec-10_005070
Ectocarpus siliculosus
3.2e-134
480.3
520
48.5
PSNMU-V1.4_AUG-EV-PASAV3_0016970
Pseudo-nitzschia multistriata
1.9e-131
471.1
590
46.3
gene20466
Fragilariopsis cylindrus
3.9e-124
446.8
462
52.2
Naga_100125g10
Nannochloropsis gaditana
2.1e-122
441.0
551
45.7
ps00G22320
Pseudo-nitzschia multiseries
3.2e-118
427.2
378
57.1
AA0058G00020
Aureococcus anophagefferens
2.7e-117
424.1
497
46.9
FBgn0264326
Drosophila melanogaster
4.3e-107
390.2
453
47.9
YNL262W
Saccharomyces cerevisiae strain S288C
1.4e-105
385.2
555
40.0
AT1G08260
Arabidopsis thaliana
3.4e-104
380.6
438
47.0
SPBC25H2.13c
Schizosaccharomyces pombe
8.4e-103
375.9
486
40.3
AT2G27120
Arabidopsis thaliana
1.2e-101
372.1
453
45.5
ENSG00000177084
Homo sapiens
1.6e-101
371.7
493
41.8
WBGene00009368
Caenorhabditis elegans
3.0e-100
367.5
450
45.8
Pp3c13_4500
Physcomitrella patens
1.1e-99
365.5
531
41.2
ccr171860
Chondrus crispus
3.7e-98
360.5
486
42.2
Cre03.g179961
Chlamydomonas reinhardtii
1.4e-94
348.6
293
59.0
gsu133780
Galdieria sulphuraria
5.7e-91
336.7
480
40.4
CM17G00980
Cyanidioschyzon merolae
1.7e-90
335.1
458
42.4
pte125380
Paramecium tetraurelia
1.1e-75
285.8
442
37.3
emh452610
Emiliania huxleyi
1.1e-17
93.2
130
40.8
Ec-00_003210
Ectocarpus siliculosus
1.7e-10
69.3
184
27.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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