Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G134960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G134960
Cyclotella cryptica
1.0e-216
753.8
373
100.0
CC00G210280
Cyclotella cryptica
5.9e-185
648.3
397
81.4
CC00G143730
Cyclotella cryptica
1.4e-146
520.8
309
86.1
CC00G193540
Cyclotella cryptica
1.6e-145
517.3
390
67.2
CC00G118060
Cyclotella cryptica
1.1e-143
511.1
390
66.4
CC00G143610
Cyclotella cryptica
1.1e-143
511.1
399
66.9
CC00G177430
Cyclotella cryptica
6.2e-142
505.4
396
65.2
CC00G157170
Cyclotella cryptica
8.1e-142
505.0
390
66.7
CC00G169820
Cyclotella cryptica
2.7e-137
490.0
392
63.3
CC00G76080
Cyclotella cryptica
1.3e-62
241.9
206
64.6
CC00G200330
Cyclotella cryptica
2.2e-54
214.5
163
63.2
CC00G117370
Cyclotella cryptica
3.3e-50
200.7
197
56.3
CC00G124100
Cyclotella cryptica
1.2e-39
165.6
130
63.1
sya00G230040
Synedra acus
6.0e-20
100.1
362
24.9
sya00G249510
Synedra acus
5.1e-19
97.1
313
24.9
sya00G178340
Synedra acus
1.9e-18
95.1
384
22.9
sya00G07560
Synedra acus
2.5e-18
94.7
402
21.6
sya00G171150
Synedra acus
5.6e-18
93.6
379
24.3
sya00G236140
Synedra acus
9.6e-18
92.8
339
27.4
sya00G96210
Synedra acus
8.1e-17
89.7
345
25.5
sya00G96250
Synedra acus
8.1e-17
89.7
345
25.5
sya00G109280
Synedra acus
8.1e-17
89.7
345
25.5
sya00G213030
Synedra acus
8.1e-17
89.7
345
25.5
sya00G169930
Synedra acus
2.4e-16
88.2
351
23.6
fso112160
Fistulifera solaris
2.0e-15
85.1
231
26.4
sya00G89520
Synedra acus
4.4e-15
84.0
351
24.5
fso21490
Fistulifera solaris
6.4e-14
80.1
231
25.5
Sro1139_g245450
Seminavis robusta
1.4e-13
79.0
289
22.5
sya00G234880
Synedra acus
9.3e-13
76.3
350
21.7
sya00G244870
Synedra acus
4.6e-12
73.9
211
26.1
sya00G59810
Synedra acus
7.8e-12
73.2
209
26.8
sya00G264800
Synedra acus
1.0e-11
72.8
144
34.0
sya00G231320
Synedra acus
6.6e-11
70.1
265
23.0
sya00G185020
Synedra acus
4.3e-10
67.4
207
23.7
sya00G228420
Synedra acus
5.6e-10
67.0
396
19.9
sya00G60460
Synedra acus
3.1e-08
61.2
106
34.9
ps00G05450
Pseudo-nitzschia multiseries
4.0e-08
60.8
208
25.5
sya00G160600
Synedra acus
5.3e-08
60.5
138
29.7
sya00G62610
Synedra acus
9.9e-07
56.2
298
24.2
sya00G31870
Synedra acus
1.3e-06
55.8
149
23.5
PSNMU-V1.4_AUG-EV-PASAV3_0065300
Pseudo-nitzschia multistriata
6.4e-06
53.5
230
21.7
sya00G75680
Synedra acus
8.4e-06
53.1
215
23.7
sya00G157380
Synedra acus
8.4e-06
53.1
140
27.1
sya00G175600
Synedra acus
8.4e-06
53.1
308
21.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (13 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (26 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing