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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G133790
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G133790
Cyclotella cryptica
3.7e-285
981.5
468
100.0
CC00G95020
Cyclotella cryptica
2.0e-190
666.8
507
62.3
ptri47850
Phaeodactylum tricornutum
7.5e-137
488.8
458
51.5
ps00G57480
Pseudo-nitzschia multiseries
3.7e-136
486.5
458
51.3
Sro2261_g321150
Seminavis robusta
1.0e-133
478.4
457
52.1
fso49480
Fistulifera solaris
1.1e-130
468.4
459
50.8
fso27200
Fistulifera solaris
8.9e-130
465.3
460
50.4
tps212020
Thalassiosira pseudonana
3.1e-122
440.3
288
71.2
PSNMU-V1.4_AUG-EV-PASAV3_0062170
Pseudo-nitzschia multistriata
2.1e-118
427.6
460
47.6
sya00G64440
Synedra acus
2.4e-114
414.1
461
46.6
sya00G172000
Synedra acus
7.3e-100
365.9
468
43.4
CC00G79370
Cyclotella cryptica
2.4e-95
350.9
489
40.3
gene3451
Fragilariopsis cylindrus
3.5e-94
347.1
288
55.9
tps73080
Thalassiosira pseudonana
3.2e-87
323.9
485
37.9
gene7251
Fragilariopsis cylindrus
1.2e-86
322.0
289
53.6
Cre13.g565600
Chlamydomonas reinhardtii
4.3e-68
260.4
453
35.5
AA0001G01220
Aureococcus anophagefferens
3.0e-61
237.7
433
36.0
ptri205380
Phaeodactylum tricornutum
4.4e-60
233.8
456
34.9
sya00G228240
Synedra acus
4.5e-57
223.8
353
36.5
tho21620
Thalassiosira oceanica
2.8e-35
151.4
229
39.3
emh29350
Emiliania huxleyi
1.5e-28
129.0
217
37.8
pte501940
Paramecium tetraurelia
9.8e-12
73.2
185
28.6
ENSG00000135049
Homo sapiens
1.1e-10
69.7
336
22.9
pte674870
Paramecium tetraurelia
1.4e-10
69.3
151
29.1
pte428270
Paramecium tetraurelia
3.5e-09
64.7
229
24.0
pte408580
Paramecium tetraurelia
4.6e-09
64.3
145
29.7
pte577730
Paramecium tetraurelia
1.0e-08
63.2
110
30.0
pte418310
Paramecium tetraurelia
1.3e-08
62.8
229
24.0
Ec-00_007300
Ectocarpus siliculosus
1.7e-08
62.4
156
30.1
ENSG00000166748
Homo sapiens
2.3e-08
62.0
339
23.0
Ec-14_002450
Ectocarpus siliculosus
1.1e-07
59.7
225
23.1
pte449010
Paramecium tetraurelia
1.1e-07
59.7
143
28.0
pte218490
Paramecium tetraurelia
1.5e-07
59.3
207
22.7
ENSG00000146856
Homo sapiens
1.9e-07
58.9
321
22.4
ENSG00000084693
Homo sapiens
3.3e-07
58.2
193
23.3
pte288460
Paramecium tetraurelia
4.3e-07
57.8
197
24.9
AA0024G00200
Aureococcus anophagefferens
7.3e-07
57.0
127
30.7
pte168410
Paramecium tetraurelia
9.5e-07
56.6
180
28.3
pte267230
Paramecium tetraurelia
9.5e-07
56.6
151
26.5
AA0020G01370
Aureococcus anophagefferens
1.2e-06
56.2
249
23.7
pte157800
Paramecium tetraurelia
2.1e-06
55.5
197
24.4
pte779620
Paramecium tetraurelia
2.8e-06
55.1
160
22.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (13 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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