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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G130510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G130510
Cyclotella cryptica
2.4e-287
988.8
494
100.0
tps00540
Thalassiosira pseudonana
6.4e-86
319.7
475
41.7
tho439680
Thalassiosira oceanica
5.6e-74
280.0
507
37.5
tps41100
Thalassiosira pseudonana
4.0e-72
273.9
192
68.2
sya00G221880
Synedra acus
3.0e-59
231.1
484
33.1
fso129370
Fistulifera solaris
6.9e-56
219.9
485
32.4
fso53740
Fistulifera solaris
3.5e-52
207.6
478
31.6
ptri113240
Phaeodactylum tricornutum
2.5e-50
201.4
487
32.2
emh492180
Emiliania huxleyi
2.6e-47
191.4
476
31.1
emh458120
Emiliania huxleyi
2.6e-47
191.4
476
31.1
Sro409_g137200
Seminavis robusta
4.2e-45
184.1
480
29.2
ps00G194060
Pseudo-nitzschia multiseries
2.7e-44
181.4
476
31.3
gene1576
Fragilariopsis cylindrus
1.0e-43
179.5
485
31.5
gene14460
Fragilariopsis cylindrus
4.3e-42
174.1
485
28.9
AA0010G01900
Aureococcus anophagefferens
7.4e-42
173.3
474
31.0
Pp3c19_11620
Physcomitrella patens
1.9e-37
158.7
477
27.0
AT5G55760
Arabidopsis thaliana
3.5e-36
154.5
474
27.0
tho484180
Thalassiosira oceanica
2.8e-33
144.8
364
31.6
ENSG00000077463
Homo sapiens
5.9e-31
137.1
220
40.0
FBgn0037802
Drosophila melanogaster
9.3e-29
129.8
480
25.0
ccr74980
Chondrus crispus
5.7e-26
120.6
223
34.1
CM13G01360
Cyanidioschyzon merolae
1.6e-25
119.0
476
25.8
Ec-19_000750
Ectocarpus siliculosus
2.8e-25
118.2
177
40.1
Cre10.g462200
Chlamydomonas reinhardtii
4.1e-24
114.4
218
33.9
ENSG00000187531
Homo sapiens
9.4e-21
103.2
255
32.9
WBGene00004803
Caenorhabditis elegans
8.8e-19
96.7
184
32.1
FBgn0039631
Drosophila melanogaster
7.4e-18
93.6
235
31.1
gsu108850
Galdieria sulphuraria
8.2e-17
90.1
171
30.4
Pp3c3_24240
Physcomitrella patens
1.1e-16
89.7
243
30.0
emh680950
Emiliania huxleyi
1.3e-09
66.2
69
46.4
emh94320
Emiliania huxleyi
1.3e-09
66.2
69
46.4
emh79800
Emiliania huxleyi
1.3e-09
66.2
69
46.4
ptri232750
Phaeodactylum tricornutum
2.8e-09
65.1
69
44.9
Sro656_g182440
Seminavis robusta
1.4e-08
62.8
66
45.5
Sro137_g064410
Seminavis robusta
1.8e-08
62.4
74
41.9
Sro521_g159500
Seminavis robusta
5.3e-08
60.8
181
29.3
fso72690
Fistulifera solaris
7.0e-08
60.5
71
42.3
fso102810
Fistulifera solaris
7.0e-08
60.5
71
42.3
sya00G230150
Synedra acus
1.2e-07
59.7
75
40.0
CC00G131160
Cyclotella cryptica
1.6e-07
59.3
70
41.4
tps119080
Thalassiosira pseudonana
2.0e-07
58.9
70
42.9
emh217760
Emiliania huxleyi
3.5e-07
58.2
185
27.6
gene1566
Fragilariopsis cylindrus
3.5e-07
58.2
76
38.2
PSNMU-V1.4_AUG-EV-PASAV3_0095030
Pseudo-nitzschia multistriata
3.5e-07
58.2
66
43.9
emh455680
Emiliania huxleyi
4.5e-07
57.8
185
27.6
sya00G43000
Synedra acus
4.5e-07
57.8
191
25.1
FBgn0038788
Drosophila melanogaster
5.9e-07
57.4
113
31.9
tho140580
Thalassiosira oceanica
7.7e-07
57.0
124
31.5
ps00G174410
Pseudo-nitzschia multiseries
1.0e-06
56.6
73
39.7
fso166530
Fistulifera solaris
2.2e-06
55.5
82
37.8
ptri139110
Phaeodactylum tricornutum
2.9e-06
55.1
199
24.1
emh392000
Emiliania huxleyi
3.8e-06
54.7
50
44.0
emh233240
Emiliania huxleyi
3.8e-06
54.7
50
44.0
fso40740
Fistulifera solaris
5.0e-06
54.3
82
37.8
AT3G54460
Arabidopsis thaliana
6.5e-06
53.9
86
31.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing