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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G128680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G128680
Cyclotella cryptica
2.3e-174
613.2
410
100.0
Sro1589_g284340
Seminavis robusta
3.8e-44
180.6
396
42.9
tho431040
Thalassiosira oceanica
1.4e-41
172.2
369
46.6
tps06150
Thalassiosira pseudonana
1.3e-36
155.6
288
61.5
ptri40620
Phaeodactylum tricornutum
3.3e-35
151.0
432
39.6
fso156120
Fistulifera solaris
4.4e-32
140.6
394
43.1
fso87360
Fistulifera solaris
5.7e-32
140.2
394
42.6
gene18544
Fragilariopsis cylindrus
1.1e-30
136.0
368
44.8
ps00G09950
Pseudo-nitzschia multiseries
1.6e-29
132.1
368
44.3
CM03G01590
Cyanidioschyzon merolae
7.5e-24
113.2
404
42.3
sya00G113070
Synedra acus
2.3e-20
101.7
87
52.9
gsu87850
Galdieria sulphuraria
3.2e-14
81.3
84
46.4
gsu87870
Galdieria sulphuraria
3.2e-14
81.3
84
46.4
WBGene00013862
Caenorhabditis elegans
3.5e-13
77.8
84
39.3
Naga_100025g37
Nannochloropsis gaditana
6.0e-13
77.0
95
42.1
AT4G02730
Arabidopsis thaliana
1.0e-12
76.3
88
44.3
FBgn0034274
Drosophila melanogaster
1.1e-09
66.2
90
33.3
emh503390
Emiliania huxleyi
1.1e-09
66.2
82
42.7
gsu30210
Galdieria sulphuraria
1.4e-09
65.9
104
35.6
gsu30230
Galdieria sulphuraria
1.4e-09
65.9
104
35.6
Ec-04_006320
Ectocarpus siliculosus
3.1e-09
64.7
154
27.3
Ec-17_002790
Ectocarpus siliculosus
1.5e-08
62.4
82
42.7
fso30640
Fistulifera solaris
2.6e-08
61.6
99
31.3
fso119410
Fistulifera solaris
2.6e-08
61.6
99
31.3
sya00G238240
Synedra acus
4.4e-08
60.8
135
31.1
WBGene00006474
Caenorhabditis elegans
7.5e-08
60.1
75
36.0
AA0004G03700
Aureococcus anophagefferens
9.9e-08
59.7
74
43.2
AT4G32551
Arabidopsis thaliana
9.9e-08
59.7
97
35.1
Sro14_g010590
Seminavis robusta
1.3e-07
59.3
143
31.5
CC00G44790
Cyclotella cryptica
2.2e-07
58.5
94
35.1
FBgn0033526
Drosophila melanogaster
2.2e-07
58.5
143
25.9
ENSG00000196981
Homo sapiens
2.2e-07
58.5
75
34.7
ENSG00000196363
Homo sapiens
3.7e-07
57.8
75
33.3
AT3G44530
Arabidopsis thaliana
6.4e-07
57.0
136
27.9
emh279760
Emiliania huxleyi
6.4e-07
57.0
166
29.5
PSNMU-V1.4_AUG-EV-PASAV3_0107850
Pseudo-nitzschia multistriata
6.4e-07
57.0
107
36.4
sya00G04600
Synedra acus
6.4e-07
57.0
104
28.8
CC00G136390
Cyclotella cryptica
8.3e-07
56.6
98
37.8
gsu61650
Galdieria sulphuraria
8.3e-07
56.6
85
40.0
tho157840
Thalassiosira oceanica
8.3e-07
56.6
98
37.8
CM12G01000
Cyanidioschyzon merolae
1.1e-06
56.2
103
29.1
ENSG00000109046
Homo sapiens
1.1e-06
56.2
131
29.0
Pp3c7_9990
Physcomitrella patens
1.1e-06
56.2
89
31.5
Pp3c2_31650
Physcomitrella patens
1.4e-06
55.8
97
37.1
Pp3c3_26050
Physcomitrella patens
1.4e-06
55.8
94
36.2
Pp3c2_31720
Physcomitrella patens
2.4e-06
55.1
97
36.1
emh535620
Emiliania huxleyi
3.2e-06
54.7
94
30.9
AT5G56130
Arabidopsis thaliana
4.1e-06
54.3
91
33.0
fso63500
Fistulifera solaris
4.1e-06
54.3
93
30.1
Ec-07_003630
Ectocarpus siliculosus
5.4e-06
53.9
133
31.6
Naga_100013g31
Nannochloropsis gaditana
5.4e-06
53.9
89
31.5
ptri197830
Phaeodactylum tricornutum
5.4e-06
53.9
94
37.2
Sro576_g169520
Seminavis robusta
5.4e-06
53.9
156
28.2
AT5G54200
Arabidopsis thaliana
7.1e-06
53.5
137
29.2
gene20799
Fragilariopsis cylindrus
7.1e-06
53.5
95
35.8
Pp3c15_21840
Physcomitrella patens
7.1e-06
53.5
89
36.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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