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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G125450
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G125450
Cyclotella cryptica
3.1e-280
965.3
534
100.0
tps04890
Thalassiosira pseudonana
9.2e-139
495.4
569
48.5
tho83380
Thalassiosira oceanica
2.3e-97
357.8
562
41.1
CC00G04190
Cyclotella cryptica
2.2e-60
235.0
296
41.6
CC00G20660
Cyclotella cryptica
1.4e-57
225.7
338
39.9
sya00G18180
Synedra acus
5.7e-56
220.3
316
39.6
Sro146_g067600
Seminavis robusta
2.4e-54
214.9
325
39.1
ptri223620
Phaeodactylum tricornutum
4.1e-54
214.2
312
40.1
Sro397_g134500
Seminavis robusta
2.0e-53
211.8
316
38.3
ptri102840
Phaeodactylum tricornutum
2.9e-52
208.0
324
37.7
fso54330
Fistulifera solaris
1.4e-51
205.7
217
49.8
fso123590
Fistulifera solaris
4.2e-51
204.1
221
48.4
ptri38000
Phaeodactylum tricornutum
2.8e-47
191.4
168
51.8
sya00G204430
Synedra acus
1.3e-44
182.6
251
41.0
tps217210
Thalassiosira pseudonana
1.3e-44
182.6
343
37.9
tho236220
Thalassiosira oceanica
4.2e-43
177.6
157
53.5
CC00G50050
Cyclotella cryptica
6.1e-42
173.7
183
48.1
PSNMU-V1.4_AUG-EV-PASAV3_0096850
Pseudo-nitzschia multistriata
6.1e-42
173.7
198
45.5
sya00G45300
Synedra acus
1.2e-40
169.5
172
44.8
Sro97_g049870
Seminavis robusta
3.3e-40
167.9
302
34.8
sya00G257970
Synedra acus
1.7e-39
165.6
442
29.9
tho313600
Thalassiosira oceanica
3.1e-38
161.4
217
42.4
fso32680
Fistulifera solaris
2.0e-37
158.7
262
36.3
fso204230
Fistulifera solaris
2.7e-37
158.3
237
37.1
Sro1873_g302910
Seminavis robusta
2.7e-37
158.3
184
42.9
gene17102
Fragilariopsis cylindrus
3.5e-37
157.9
175
45.7
CC00G50040
Cyclotella cryptica
2.9e-36
154.8
173
46.2
gene3424
Fragilariopsis cylindrus
3.8e-36
154.5
201
42.3
sya00G45290
Synedra acus
3.8e-36
154.5
189
43.9
ps00G173110
Pseudo-nitzschia multiseries
5.0e-36
154.1
175
45.1
ptri116240
Phaeodactylum tricornutum
6.5e-36
153.7
185
38.9
fso204240
Fistulifera solaris
1.1e-35
152.9
260
36.5
ptri179150
Phaeodactylum tricornutum
1.5e-35
152.5
243
35.0
Sro1273_g258310
Seminavis robusta
4.2e-35
151.0
200
41.5
ptri102860
Phaeodactylum tricornutum
1.6e-34
149.1
239
34.7
Sro753_g197300
Seminavis robusta
4.7e-34
147.5
171
40.9
fso32630
Fistulifera solaris
1.2e-32
142.9
247
36.0
tps145150
Thalassiosira pseudonana
1.2e-32
142.9
189
41.8
tho236240
Thalassiosira oceanica
1.2e-29
132.9
138
50.0
ps00G53250
Pseudo-nitzschia multiseries
1.0e-28
129.8
208
36.1
ps00G60980
Pseudo-nitzschia multiseries
4.2e-27
124.4
101
56.4
fso32660
Fistulifera solaris
1.7e-23
112.5
200
35.0
fso32670
Fistulifera solaris
2.8e-23
111.7
142
41.5
fso204220
Fistulifera solaris
4.9e-23
110.9
200
35.5
gene5590
Fragilariopsis cylindrus
5.0e-12
74.3
213
29.1
gene18619
Fragilariopsis cylindrus
1.5e-11
72.8
213
29.1
PSNMU-V1.4_AUG-EV-PASAV3_0038030
Pseudo-nitzschia multistriata
3.1e-09
65.1
203
27.1
sya00G38300
Synedra acus
4.4e-08
61.2
219
27.4
ps00G132820
Pseudo-nitzschia multiseries
4.9e-07
57.8
111
36.0
ps00G129430
Pseudo-nitzschia multiseries
2.4e-06
55.5
155
27.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (6 genes)
Synedra acus (6 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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