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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G124680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G111870
Cyclotella cryptica
0.0e+00
1528.1
746
100.0
CC00G124680
Cyclotella cryptica
0.0e+00
1528.1
746
100.0
CC00G197950
Cyclotella cryptica
0.0e+00
1528.1
746
100.0
CC00G124660
Cyclotella cryptica
0.0e+00
1323.1
644
100.0
CC00G33820
Cyclotella cryptica
8.3e-239
828.2
712
58.1
tho258620
Thalassiosira oceanica
1.0e-188
661.8
663
53.7
gene7260
Fragilariopsis cylindrus
4.1e-137
490.3
636
44.2
sya00G41010
Synedra acus
6.6e-135
483.0
669
43.0
fso50470
Fistulifera solaris
1.5e-134
481.9
660
42.0
ps00G185410
Pseudo-nitzschia multiseries
3.3e-134
480.7
643
44.3
PSNMU-V1.4_AUG-EV-PASAV3_0065830
Pseudo-nitzschia multistriata
1.8e-132
474.9
636
43.4
Sro48_g028410
Seminavis robusta
2.3e-132
474.6
639
43.3
fso108830
Fistulifera solaris
7.5e-131
469.5
637
43.0
ptri97390
Phaeodactylum tricornutum
1.7e-127
458.4
637
41.0
Sro1854_g301900
Seminavis robusta
5.6e-110
400.2
682
37.4
Sro1301_g260840
Seminavis robusta
2.1e-109
398.3
681
37.0
sya00G269980
Synedra acus
8.4e-106
386.3
619
38.6
fso114550
Fistulifera solaris
9.0e-100
366.3
621
36.6
fso187870
Fistulifera solaris
2.6e-99
364.8
629
36.4
gene12596
Fragilariopsis cylindrus
1.1e-92
342.8
660
35.0
gene12604
Fragilariopsis cylindrus
4.8e-85
317.4
666
33.2
gene7259
Fragilariopsis cylindrus
1.4e-81
305.8
675
31.7
Ec-24_000110
Ectocarpus siliculosus
6.0e-80
300.4
639
33.3
emh724720
Emiliania huxleyi
4.5e-59
231.1
636
30.8
CM08G01740
Cyanidioschyzon merolae
6.7e-55
217.2
675
29.5
tps16760
Thalassiosira pseudonana
1.1e-52
209.9
656
28.4
ccr156360
Chondrus crispus
4.1e-52
208.0
484
30.6
CC00G101530
Cyclotella cryptica
3.5e-51
204.9
600
29.5
gsu19280
Galdieria sulphuraria
1.3e-42
176.4
367
33.8
pte195630
Paramecium tetraurelia
2.0e-27
125.9
334
27.5
tho411740
Thalassiosira oceanica
1.4e-23
113.2
119
52.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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