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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G123500
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G123500
Cyclotella cryptica
6.2e-100
364.8
177
100.0
CC00G134840
Cyclotella cryptica
1.0e-62
241.1
129
89.9
tho42620
Thalassiosira oceanica
1.1e-59
231.1
112
95.5
tps07570
Thalassiosira pseudonana
4.1e-59
229.2
114
93.9
gene5986
Fragilariopsis cylindrus
3.7e-52
206.1
110
84.5
gene4981
Fragilariopsis cylindrus
3.7e-52
206.1
110
84.5
fso132490
Fistulifera solaris
6.3e-52
205.3
123
77.2
fso165500
Fistulifera solaris
6.3e-52
205.3
123
77.2
ptri64800
Phaeodactylum tricornutum
1.4e-51
204.1
114
82.5
Sro693_g188270
Seminavis robusta
3.1e-51
203.0
112
82.1
ps00G111250
Pseudo-nitzschia multiseries
5.9e-50
198.7
125
74.4
sya00G106670
Synedra acus
5.0e-49
195.7
112
77.7
PSNMU-V1.4_AUG-EV-PASAV3_0123550
Pseudo-nitzschia multistriata
3.2e-48
193.0
110
80.0
Ec-23_003070
Ectocarpus siliculosus
1.4e-46
187.6
109
72.5
AA0029G00050
Aureococcus anophagefferens
2.5e-40
166.8
125
59.2
ENSG00000140988
Homo sapiens
4.2e-40
166.0
113
68.1
Naga_100062g29
Nannochloropsis gaditana
4.2e-40
166.0
112
65.2
FBgn0004867
Drosophila melanogaster
5.5e-40
165.6
109
68.8
WBGene00004471
Caenorhabditis elegans
1.8e-38
160.6
109
64.2
Cre01.g039250
Chlamydomonas reinhardtii
1.5e-37
157.5
112
61.6
AT1G58380
Arabidopsis thaliana
2.0e-37
157.1
112
59.8
AT1G58684
Arabidopsis thaliana
2.0e-37
157.1
112
59.8
AT1G58983
Arabidopsis thaliana
2.0e-37
157.1
112
59.8
AT1G59359
Arabidopsis thaliana
2.0e-37
157.1
112
59.8
AT2G41840
Arabidopsis thaliana
4.4e-37
156.0
112
58.9
Pp3c24_5780
Physcomitrella patens
2.2e-36
153.7
109
61.5
Pp3c20_18740
Physcomitrella patens
2.2e-36
153.7
109
61.5
Pp3c8_5640
Physcomitrella patens
2.2e-36
153.7
109
61.5
gsu127360
Galdieria sulphuraria
2.8e-36
153.3
109
61.5
AT3G57490
Arabidopsis thaliana
3.7e-36
152.9
107
60.7
pte638240
Paramecium tetraurelia
1.1e-35
151.4
108
61.1
ccr111380
Chondrus crispus
1.4e-35
151.0
112
57.1
pte205560
Paramecium tetraurelia
2.4e-35
150.2
108
60.2
pte366790
Paramecium tetraurelia
2.4e-35
150.2
108
60.2
SPCC576.08c
Schizosaccharomyces pombe
1.3e-33
144.4
111
57.7
CM01G00820
Cyanidioschyzon merolae
7.2e-32
138.7
109
56.0
YGL123W
Saccharomyces cerevisiae strain S288C
4.7e-31
136.0
113
54.0
Pp3c24_5500
Physcomitrella patens
2.4e-27
123.6
93
58.1
emh207940
Emiliania huxleyi
4.7e-15
82.8
58
56.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing