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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G120200
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G120200
Cyclotella cryptica
1.4e-210
733.4
366
100.0
tps122870
Thalassiosira pseudonana
3.8e-168
592.4
368
80.4
tho409200
Thalassiosira oceanica
2.2e-147
523.5
367
70.3
Sro1830_g300310
Seminavis robusta
1.9e-90
334.3
370
47.8
ptri15010
Phaeodactylum tricornutum
6.0e-89
329.3
367
45.0
sya00G103910
Synedra acus
8.0e-86
318.9
364
46.2
fso174830
Fistulifera solaris
1.8e-85
317.8
368
44.8
fso66600
Fistulifera solaris
2.0e-84
314.3
368
44.3
ps00G22320
Pseudo-nitzschia multiseries
4.6e-81
303.1
374
44.4
gene20466
Fragilariopsis cylindrus
8.6e-80
298.9
374
43.0
PSNMU-V1.4_AUG-EV-PASAV3_0016970
Pseudo-nitzschia multistriata
8.6e-80
298.9
371
43.7
Pp3c13_4500
Physcomitrella patens
1.1e-50
202.2
377
34.2
ENSG00000177084
Homo sapiens
2.4e-37
157.9
376
27.9
SPBC25H2.13c
Schizosaccharomyces pombe
7.1e-34
146.4
367
30.2
AT1G08260
Arabidopsis thaliana
7.9e-33
142.9
367
28.6
Ec-10_005070
Ectocarpus siliculosus
1.8e-29
131.7
498
23.5
AT2G27120
Arabidopsis thaliana
6.9e-29
129.8
364
26.9
ccr171860
Chondrus crispus
7.2e-26
119.8
375
27.5
FBgn0264326
Drosophila melanogaster
5.1e-24
113.6
387
23.0
YNL262W
Saccharomyces cerevisiae strain S288C
1.3e-22
109.0
367
23.7
Cre03.g179961
Chlamydomonas reinhardtii
3.7e-22
107.5
384
26.6
Naga_100125g10
Nannochloropsis gaditana
2.4e-21
104.8
537
19.9
emh452610
Emiliania huxleyi
2.8e-14
81.3
137
33.6
emh122000
Emiliania huxleyi
1.9e-10
68.6
100
35.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing