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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G120080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G120080
Cyclotella cryptica
2.6e-247
855.5
406
100.0
tho55100
Thalassiosira oceanica
2.7e-183
642.9
408
76.7
tps171490
Thalassiosira pseudonana
7.9e-183
641.3
366
83.6
tps03190
Thalassiosira pseudonana
6.0e-167
588.6
402
68.9
tho277000
Thalassiosira oceanica
2.8e-164
579.7
405
67.9
PSNMU-V1.4_AUG-EV-PASAV3_0057390
Pseudo-nitzschia multistriata
1.0e-158
561.2
386
67.6
ps00G86570
Pseudo-nitzschia multiseries
1.3e-158
560.8
386
67.9
gene4605
Fragilariopsis cylindrus
4.8e-156
552.4
411
65.5
gene3644
Fragilariopsis cylindrus
2.4e-155
550.1
386
67.4
emh464180
Emiliania huxleyi
4.1e-139
496.1
390
62.3
Naga_100002g38
Nannochloropsis gaditana
6.8e-118
425.6
370
55.1
Ec-06_008260
Ectocarpus siliculosus
4.9e-116
419.5
370
54.6
ptri121100
Phaeodactylum tricornutum
1.6e-114
414.5
374
55.1
fso157450
Fistulifera solaris
2.3e-113
410.6
372
54.8
fso172170
Fistulifera solaris
3.8e-113
409.8
371
55.3
AT3G58140
Arabidopsis thaliana
2.0e-106
387.5
365
53.4
Cre02.g079600
Chlamydomonas reinhardtii
2.7e-106
387.1
395
51.1
sya00G259610
Synedra acus
2.3e-105
384.0
388
52.3
Sro87_g046210
Seminavis robusta
1.6e-103
377.9
383
51.7
Pp3c5_15740
Physcomitrella patens
2.8e-103
377.1
371
51.2
pte225520
Paramecium tetraurelia
4.7e-103
376.3
368
50.0
ENSG00000145982
Homo sapiens
2.0e-98
360.9
432
46.1
FBgn0020766
Drosophila melanogaster
1.2e-95
351.7
427
44.5
emh642020
Emiliania huxleyi
2.8e-95
350.5
390
49.5
CC00G03130
Cyclotella cryptica
1.8e-94
347.8
231
70.1
CM17G03540
Cyanidioschyzon merolae
5.2e-94
346.3
421
44.7
gsu127820
Galdieria sulphuraria
1.3e-92
341.7
368
46.5
YPR047W
Saccharomyces cerevisiae strain S288C
4.9e-92
339.7
430
43.0
ccr92820
Chondrus crispus
1.7e-89
331.3
389
44.2
SPCC736.03c
Schizosaccharomyces pombe
2.1e-82
307.8
419
41.3
WBGene00013361
Caenorhabditis elegans
2.7e-82
307.4
400
41.0
ptri229970
Phaeodactylum tricornutum
5.0e-36
153.7
251
38.2
fso53830
Fistulifera solaris
5.5e-35
150.2
250
37.2
fso129470
Fistulifera solaris
5.5e-35
150.2
250
37.2
Sro174_g076640
Seminavis robusta
1.6e-34
148.7
250
37.6
Ec-15_003330
Ectocarpus siliculosus
2.7e-34
147.9
256
37.1
sya00G258880
Synedra acus
3.0e-33
144.4
253
37.2
ccr112980
Chondrus crispus
9.1e-30
132.9
218
37.2
sya00G184200
Synedra acus
1.2e-21
105.9
280
31.4
ENSG00000255561
Homo sapiens
1.0e-17
92.8
129
34.1
YFL022C
Saccharomyces cerevisiae strain S288C
7.7e-13
76.6
278
23.7
PSNMU-V1.4_AUG-EV-PASAV3_0002360
Pseudo-nitzschia multistriata
1.3e-12
75.9
241
27.4
ps00G163920
Pseudo-nitzschia multiseries
1.3e-12
75.9
241
27.4
gene17834
Fragilariopsis cylindrus
2.9e-12
74.7
241
27.0
Cre09.g389430
Chlamydomonas reinhardtii
3.8e-12
74.3
283
25.4
WBGene00001497
Caenorhabditis elegans
6.5e-12
73.6
282
24.5
Pp3c2_16770
Physcomitrella patens
1.1e-11
72.8
278
25.9
AT4G39280
Arabidopsis thaliana
1.5e-11
72.4
239
27.2
SPAC3G9.06
Schizosaccharomyces pombe
3.2e-11
71.2
283
24.7
Ec-27_001900
Ectocarpus siliculosus
4.2e-11
70.9
242
26.4
CM09G02950
Cyanidioschyzon merolae
5.5e-11
70.5
295
23.4
FBgn0030007
Drosophila melanogaster
9.4e-11
69.7
280
25.0
ptri204820
Phaeodactylum tricornutum
9.4e-11
69.7
177
30.5
AA0001G06270
Aureococcus anophagefferens
1.2e-10
69.3
241
24.9
ENSG00000179115
Homo sapiens
1.6e-10
68.9
285
25.3
Naga_101153g1
Nannochloropsis gaditana
2.1e-10
68.6
143
32.2
sya00G231210
Synedra acus
2.1e-10
68.6
241
26.1
tho155060
Thalassiosira oceanica
2.1e-10
68.6
177
29.9
ccr148280
Chondrus crispus
2.7e-10
68.2
243
26.3
CC00G115820
Cyclotella cryptica
2.7e-10
68.2
177
29.9
tps145870
Thalassiosira pseudonana
2.7e-10
68.2
177
29.9
fso58830
Fistulifera solaris
3.6e-10
67.8
177
29.9
fso144760
Fistulifera solaris
3.6e-10
67.8
177
29.9
Sro361_g126590
Seminavis robusta
4.7e-10
67.4
177
29.9
pte720000
Paramecium tetraurelia
1.8e-09
65.5
294
24.5
pte785500
Paramecium tetraurelia
1.8e-09
65.5
294
24.5
emh742140
Emiliania huxleyi
2.3e-09
65.1
294
24.1
emh145210
Emiliania huxleyi
2.3e-09
65.1
294
24.1
pte622120
Paramecium tetraurelia
3.0e-09
64.7
294
24.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing