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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G119790
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G119790
Cyclotella cryptica
0.0e+00
1769.6
909
100.0
tps130260
Thalassiosira pseudonana
0.0e+00
1206.4
746
81.9
Sro829_g208050
Seminavis robusta
1.1e-304
1047.3
818
66.0
fso76780
Fistulifera solaris
5.0e-294
1011.9
796
64.9
fso46530
Fistulifera solaris
8.7e-291
1001.1
798
64.2
ptri130250
Phaeodactylum tricornutum
1.9e-290
1000.0
800
65.4
sya00G45360
Synedra acus
4.2e-285
982.2
820
60.9
PSNMU-V1.4_AUG-EV-PASAV3_0082120
Pseudo-nitzschia multistriata
3.0e-275
949.5
809
62.1
gene16889
Fragilariopsis cylindrus
4.1e-272
939.1
791
61.8
ps00G169000
Pseudo-nitzschia multiseries
7.7e-271
934.9
812
60.8
Ec-28_001180
Ectocarpus siliculosus
1.9e-197
691.0
779
51.0
Pp3c6_15550
Physcomitrella patens
1.6e-183
644.8
912
42.3
AT3G03710
Arabidopsis thaliana
2.2e-169
597.8
824
42.7
AA0021G00080
Aureococcus anophagefferens
5.7e-157
556.6
766
44.5
Naga_101073g1
Nannochloropsis gaditana
2.6e-154
547.7
606
48.3
ccr30780
Chondrus crispus
4.2e-152
540.4
740
41.6
gsu66490
Galdieria sulphuraria
1.4e-147
525.4
807
40.0
Cre04.g214501
Chlamydomonas reinhardtii
1.0e-142
509.2
776
40.9
tho59980
Thalassiosira oceanica
4.0e-142
507.3
328
75.6
tho60000
Thalassiosira oceanica
4.5e-138
493.8
369
70.5
CM08G01460
Cyanidioschyzon merolae
9.5e-136
486.1
765
40.3
sya00G179840
Synedra acus
5.9e-130
466.8
650
43.5
AT5G14580
Arabidopsis thaliana
6.1e-127
456.8
747
38.4
Pp3c2_19900
Physcomitrella patens
2.2e-116
421.8
723
36.7
FBgn0039846
Drosophila melanogaster
4.0e-102
374.4
719
34.1
ENSG00000138035
Homo sapiens
4.0e-102
374.4
738
33.6
Pp3c1_22150
Physcomitrella patens
2.7e-98
361.7
725
33.8
emh482830
Emiliania huxleyi
6.0e-98
360.5
796
33.3
Naga_100010g76
Nannochloropsis gaditana
6.0e-98
360.5
781
33.4
Ec-16_001470
Ectocarpus siliculosus
3.6e-95
351.3
705
34.0
gsu31610
Galdieria sulphuraria
1.1e-91
339.7
711
33.9
sya00G00770
Synedra acus
1.1e-70
270.0
901
29.1
ps00G134730
Pseudo-nitzschia multiseries
2.0e-69
265.8
705
32.6
PSNMU-V1.4_AUG-EV-PASAV3_0121390
Pseudo-nitzschia multistriata
4.5e-69
264.6
897
27.1
WBGene00015266
Caenorhabditis elegans
3.8e-68
261.5
618
31.9
tps203110
Thalassiosira pseudonana
3.2e-67
258.5
709
30.6
gene8770
Fragilariopsis cylindrus
2.7e-66
255.4
678
32.3
CM17G03240
Cyanidioschyzon merolae
1.6e-63
246.1
722
29.5
ptri165950
Phaeodactylum tricornutum
1.7e-60
236.1
918
28.3
ccr183720
Chondrus crispus
1.6e-58
229.6
612
31.2
sya00G124920
Synedra acus
2.3e-57
225.7
466
35.4
Sro4_g002940
Seminavis robusta
1.7e-55
219.5
563
32.1
CC00G183210
Cyclotella cryptica
3.1e-54
215.3
505
33.1
Sro968_g226120
Seminavis robusta
2.6e-45
185.7
160
63.8
AT2G47220
Arabidopsis thaliana
3.5e-13
79.0
103
42.7
tho583960
Thalassiosira oceanica
1.0e-12
77.4
177
37.3
Cre06.g284500
Chlamydomonas reinhardtii
3.3e-11
72.4
244
29.9
Pp3s48_50
Physcomitrella patens
6.1e-10
68.2
230
27.0
sya00G227640
Synedra acus
1.4e-09
67.0
295
26.4
sya00G177690
Synedra acus
2.6e-08
62.8
295
25.4
AT3G61620
Arabidopsis thaliana
1.3e-07
60.5
246
25.2
fso28300
Fistulifera solaris
7.0e-06
54.7
236
23.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (6 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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