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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G114730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G114730
Cyclotella cryptica
0.0e+00
2324.3
1399
100.0
tps55780
Thalassiosira pseudonana
0.0e+00
1255.4
1105
61.4
Sro2694_g334870
Seminavis robusta
3.3e-130
468.4
1075
33.8
ptri72500
Phaeodactylum tricornutum
2.2e-110
402.5
1060
29.2
sya00G86080
Synedra acus
1.3e-97
360.1
1061
30.1
fso20730
Fistulifera solaris
1.5e-82
310.1
917
29.3
fso198660
Fistulifera solaris
6.2e-81
304.7
887
29.4
tho452500
Thalassiosira oceanica
3.4e-63
245.7
504
34.7
gene15229
Fragilariopsis cylindrus
1.9e-61
240.0
997
25.9
ps00G118160
Pseudo-nitzschia multiseries
7.9e-60
234.6
1006
26.8
PSNMU-V1.4_AUG-EV-PASAV3_0027020
Pseudo-nitzschia multistriata
3.9e-59
232.3
991
26.2
Ec-01_003250
Ectocarpus siliculosus
1.4e-48
197.2
640
28.9
Naga_101213g1
Nannochloropsis gaditana
5.9e-31
138.7
443
29.1
Pp3c1_22750
Physcomitrella patens
7.7e-31
138.3
611
24.9
Pp3c1_22900
Physcomitrella patens
2.9e-30
136.3
611
25.2
WBGene00004755
Caenorhabditis elegans
5.0e-30
135.6
532
25.8
AT3G44340
Arabidopsis thaliana
4.2e-29
132.5
613
23.5
pte709110
Paramecium tetraurelia
3.4e-26
122.9
538
22.3
gsu83870
Galdieria sulphuraria
7.5e-26
121.7
556
25.0
gsu83890
Galdieria sulphuraria
2.8e-25
119.8
550
25.1
SPAC22F8.08
Schizosaccharomyces pombe
1.4e-24
117.5
532
23.9
AT4G32640
Arabidopsis thaliana
2.4e-24
116.7
616
22.9
pte415850
Paramecium tetraurelia
7.0e-24
115.2
447
22.8
gsu140230
Galdieria sulphuraria
4.5e-23
112.5
901
22.2
Cre01.g035850
Chlamydomonas reinhardtii
5.9e-23
112.1
618
24.6
ENSG00000138802
Homo sapiens
6.6e-22
108.6
495
24.2
ENSG00000176986
Homo sapiens
4.3e-21
105.9
488
23.6
tps24580
Thalassiosira pseudonana
5.6e-21
105.5
434
22.8
AT3G07100
Arabidopsis thaliana
9.5e-21
104.8
529
22.3
SPBC4.03c
Schizosaccharomyces pombe
9.5e-21
104.8
484
24.6
FBgn0033460
Drosophila melanogaster
1.6e-20
104.0
562
22.2
Pp3c1_17880
Physcomitrella patens
2.1e-20
103.6
439
24.1
Pp3c2_16660
Physcomitrella patens
6.1e-20
102.1
554
23.3
Cre02.g091150
Chlamydomonas reinhardtii
8.0e-20
101.7
538
21.2
CM17G04720
Cyanidioschyzon merolae
1.0e-19
101.3
637
23.2
ENSG00000113615
Homo sapiens
1.0e-19
101.3
448
24.3
CC00G94970
Cyclotella cryptica
8.9e-19
98.2
449
23.4
emh267620
Emiliania huxleyi
2.0e-18
97.1
436
25.7
CM17G03800
Cyanidioschyzon merolae
2.6e-18
96.7
347
29.1
ccr20040
Chondrus crispus
5.8e-18
95.5
351
24.8
fso159410
Fistulifera solaris
5.4e-16
89.0
341
25.5
ENSG00000150961
Homo sapiens
9.2e-16
88.2
327
25.4
YHR098C
Saccharomyces cerevisiae strain S288C
9.2e-16
88.2
546
22.0
fso120190
Fistulifera solaris
1.2e-15
87.8
341
24.9
ps00G146940
Pseudo-nitzschia multiseries
6.0e-15
85.5
378
23.5
YNL049C
Saccharomyces cerevisiae strain S288C
7.8e-15
85.1
492
23.6
Naga_100037g10
Nannochloropsis gaditana
5.0e-14
82.4
335
23.0
ptri108100
Phaeodactylum tricornutum
5.0e-14
82.4
384
23.4
Sro1952_g307420
Seminavis robusta
4.3e-13
79.3
364
24.2
Sro196_g083380
Seminavis robusta
5.6e-13
79.0
364
23.9
gene15378
Fragilariopsis cylindrus
1.2e-12
77.8
340
23.5
AA0010G03130
Aureococcus anophagefferens
1.4e-11
74.3
397
22.2
emh656930
Emiliania huxleyi
1.4e-11
74.3
273
26.7
sya00G192680
Synedra acus
3.1e-11
73.2
385
22.1
Ec-12_000800
Ectocarpus siliculosus
5.2e-11
72.4
241
25.7
WBGene00004756
Caenorhabditis elegans
1.2e-10
71.2
537
21.8
ccr160260
Chondrus crispus
3.4e-10
69.7
260
27.3
PSNMU-V1.4_AUG-EV-PASAV3_0109680
Pseudo-nitzschia multistriata
1.7e-09
67.4
270
24.8
sya00G192600
Synedra acus
3.5e-07
59.7
321
21.8
pte19670
Paramecium tetraurelia
8.6e-06
55.1
215
21.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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