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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G114170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G114170
Cyclotella cryptica
1.9e-68
259.6
122
100.0
CC00G108290
Cyclotella cryptica
3.4e-49
195.7
111
82.0
CC00G13990
Cyclotella cryptica
6.5e-48
191.4
109
82.6
CC00G195070
Cyclotella cryptica
2.8e-35
149.4
101
69.3
CC00G90670
Cyclotella cryptica
1.7e-32
140.2
98
65.3
CC00G135450
Cyclotella cryptica
1.7e-32
140.2
115
56.5
tho319880
Thalassiosira oceanica
9.4e-31
134.4
111
58.6
CC00G79930
Cyclotella cryptica
1.2e-30
134.0
94
66.0
tho66240
Thalassiosira oceanica
4.5e-25
115.5
95
53.7
tho87460
Thalassiosira oceanica
5.0e-24
112.1
95
54.7
tho147040
Thalassiosira oceanica
5.5e-23
108.6
108
50.0
CC00G12570
Cyclotella cryptica
4.7e-22
105.5
91
51.6
CC00G125540
Cyclotella cryptica
1.4e-21
104.0
103
49.5
CC00G150970
Cyclotella cryptica
1.5e-20
100.5
112
48.2
tho160640
Thalassiosira oceanica
3.3e-20
99.4
109
45.9
tho48640
Thalassiosira oceanica
5.7e-20
98.6
91
48.4
tho132360
Thalassiosira oceanica
5.7e-20
98.6
91
48.4
tho421040
Thalassiosira oceanica
5.7e-20
98.6
97
46.4
CC00G144060
Cyclotella cryptica
1.7e-19
97.1
111
43.2
tho144280
Thalassiosira oceanica
6.3e-19
95.1
97
44.3
tho175820
Thalassiosira oceanica
5.3e-18
92.0
97
45.4
ptri85160
Phaeodactylum tricornutum
9.1e-18
91.3
115
47.8
ptri67400
Phaeodactylum tricornutum
1.2e-17
90.9
115
47.8
ptri153780
Phaeodactylum tricornutum
1.2e-17
90.9
115
47.8
ptri240440
Phaeodactylum tricornutum
1.2e-17
90.9
115
47.8
ptri48510
Phaeodactylum tricornutum
2.0e-17
90.1
115
47.8
ptri142450
Phaeodactylum tricornutum
2.0e-17
90.1
115
47.8
ptri61420
Phaeodactylum tricornutum
3.5e-17
89.4
115
47.8
ptri51910
Phaeodactylum tricornutum
5.9e-17
88.6
115
47.0
ptri06840
Phaeodactylum tricornutum
7.7e-17
88.2
115
47.0
ptri79920
Phaeodactylum tricornutum
7.7e-17
88.2
112
47.3
tho484820
Thalassiosira oceanica
7.7e-17
88.2
124
41.9
ptri76360
Phaeodactylum tricornutum
1.0e-16
87.8
115
46.1
ptri85540
Phaeodactylum tricornutum
1.0e-16
87.8
115
46.1
gene12535
Fragilariopsis cylindrus
2.2e-16
86.7
100
45.0
tho198720
Thalassiosira oceanica
3.8e-16
85.9
86
51.2
CC00G184350
Cyclotella cryptica
5.0e-16
85.5
81
48.1
tho270060
Thalassiosira oceanica
5.0e-16
85.5
61
63.9
CC00G53130
Cyclotella cryptica
6.5e-16
85.1
98
42.9
ptri102180
Phaeodactylum tricornutum
6.5e-16
85.1
115
45.2
CC00G174360
Cyclotella cryptica
1.1e-15
84.3
108
46.3
fso67030
Fistulifera solaris
1.1e-15
84.3
104
41.3
CC00G15390
Cyclotella cryptica
3.2e-15
82.8
92
45.7
gene13423
Fragilariopsis cylindrus
3.2e-15
82.8
100
44.0
ptri48570
Phaeodactylum tricornutum
4.2e-15
82.4
110
46.4
CC00G131730
Cyclotella cryptica
5.5e-15
82.0
106
43.4
CC00G58700
Cyclotella cryptica
7.2e-15
81.6
87
46.0
ptri197270
Phaeodactylum tricornutum
7.2e-15
81.6
114
43.0
ptri89380
Phaeodactylum tricornutum
9.4e-15
81.3
114
43.9
CC00G168590
Cyclotella cryptica
4.7e-14
79.0
91
45.1
ptri102080
Phaeodactylum tricornutum
6.1e-14
78.6
115
44.3
sya00G135000
Synedra acus
4.0e-13
75.9
93
47.3
CC00G52490
Cyclotella cryptica
1.5e-12
73.9
57
61.4
ptri26830
Phaeodactylum tricornutum
1.5e-12
73.9
108
42.6
ptri26670
Phaeodactylum tricornutum
2.0e-12
73.6
96
41.7
ptri102420
Phaeodactylum tricornutum
2.0e-12
73.6
96
41.7
CC00G01680
Cyclotella cryptica
2.6e-12
73.2
73
50.7
ptri81600
Phaeodactylum tricornutum
4.4e-12
72.4
96
41.7
ptri179890
Phaeodactylum tricornutum
4.4e-12
72.4
96
41.7
ptri03420
Phaeodactylum tricornutum
5.7e-12
72.0
96
40.6
tho169800
Thalassiosira oceanica
5.7e-12
72.0
85
43.5
ptri16340
Phaeodactylum tricornutum
1.3e-11
70.9
96
40.6
tho183220
Thalassiosira oceanica
1.3e-11
70.9
107
39.3
ptri214330
Phaeodactylum tricornutum
2.8e-11
69.7
108
39.8
fso50240
Fistulifera solaris
4.8e-11
68.9
95
43.2
fso19520
Fistulifera solaris
8.2e-11
68.2
92
41.3
ptri43050
Phaeodactylum tricornutum
1.4e-10
67.4
70
51.4
ptri211530
Phaeodactylum tricornutum
3.1e-10
66.2
92
40.2
fso106470
Fistulifera solaris
4.1e-10
65.9
95
41.1
CC00G85000
Cyclotella cryptica
7.0e-10
65.1
45
68.9
ps00G195360
Pseudo-nitzschia multiseries
9.1e-10
64.7
94
39.4
CC00G196270
Cyclotella cryptica
1.6e-09
63.9
54
50.0
gene1766
Fragilariopsis cylindrus
2.7e-09
63.2
96
37.5
fso22030
Fistulifera solaris
2.7e-09
63.2
89
40.4
ps00G175360
Pseudo-nitzschia multiseries
5.9e-09
62.0
94
37.2
ptri21310
Phaeodactylum tricornutum
5.9e-09
62.0
85
41.2
gene10720
Fragilariopsis cylindrus
7.7e-09
61.6
113
33.6
ps00G15020
Pseudo-nitzschia multiseries
1.7e-08
60.5
94
37.2
ps00G195090
Pseudo-nitzschia multiseries
1.7e-08
60.5
111
36.0
gene6209
Fragilariopsis cylindrus
2.2e-08
60.1
100
36.0
ps00G125920
Pseudo-nitzschia multiseries
5.0e-08
58.9
94
36.2
tps105760
Thalassiosira pseudonana
6.5e-08
58.5
66
40.9
CC00G149670
Cyclotella cryptica
8.5e-08
58.2
85
38.8
ps00G34230
Pseudo-nitzschia multiseries
1.1e-07
57.8
94
36.2
sya00G21040
Synedra acus
2.5e-07
56.6
91
35.2
sya00G232430
Synedra acus
2.5e-07
56.6
82
37.8
sya00G90920
Synedra acus
3.2e-07
56.2
74
39.2
CC00G65090
Cyclotella cryptica
5.5e-07
55.5
29
86.2
CC00G79990
Cyclotella cryptica
7.2e-07
55.1
27
88.9
sya00G32100
Synedra acus
7.2e-07
55.1
73
41.1
ptri158730
Phaeodactylum tricornutum
2.7e-06
53.1
44
59.1
tps83360
Thalassiosira pseudonana
3.6e-06
52.8
59
47.5
CC00G102590
Cyclotella cryptica
4.7e-06
52.4
48
43.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (29 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (15 genes)
Pseudo-nitzschia multiseries (6 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (26 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (5 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing