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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G114010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G114010
Cyclotella cryptica
4.4e-295
1014.6
518
100.0
CC00G182610
Cyclotella cryptica
5.9e-151
535.8
271
100.0
tps50240
Thalassiosira pseudonana
6.8e-139
495.7
488
52.5
tho111840
Thalassiosira oceanica
5.2e-131
469.5
482
50.4
Cre14.g610750
Chlamydomonas reinhardtii
4.7e-55
217.2
476
31.1
emh543580
Emiliania huxleyi
4.7e-55
217.2
425
33.9
gsu135060
Galdieria sulphuraria
1.0e-49
199.5
424
31.8
Naga_100053g11
Nannochloropsis gaditana
1.5e-48
195.7
533
28.5
SPAC323.07c
Schizosaccharomyces pombe
9.8e-45
183.0
449
29.2
ENSG00000142494
Homo sapiens
2.2e-44
181.8
467
27.8
Pp3c2_12080
Physcomitrella patens
2.9e-41
171.4
443
27.8
Pp3c1_37590
Physcomitrella patens
6.5e-41
170.2
482
27.8
Sro15_g011090
Seminavis robusta
6.5e-41
170.2
454
25.8
Cre10.g444900
Chlamydomonas reinhardtii
5.2e-38
160.6
473
25.8
Pp3c17_22040
Physcomitrella patens
6.8e-38
160.2
444
25.9
AT1G66780
Arabidopsis thaliana
3.4e-37
157.9
441
26.8
Pp3c4_16610
Physcomitrella patens
9.8e-37
156.4
458
26.6
Pp3c14_17840
Physcomitrella patens
2.8e-36
154.8
481
25.8
AT1G11670
Arabidopsis thaliana
6.3e-36
153.7
499
24.2
ENSG00000180638
Homo sapiens
1.1e-35
152.9
516
24.0
AT1G64820
Arabidopsis thaliana
3.1e-35
151.4
451
25.5
Pp3c10_15660
Physcomitrella patens
3.1e-35
151.4
442
26.7
AT1G61890
Arabidopsis thaliana
7.0e-35
150.2
462
24.7
AT1G15160
Arabidopsis thaliana
1.2e-34
149.4
460
25.4
AT3G59030
Arabidopsis thaliana
3.5e-34
147.9
469
24.3
AT3G21690
Arabidopsis thaliana
1.0e-33
146.4
444
25.0
AT1G15150
Arabidopsis thaliana
2.9e-33
144.8
461
24.9
AT2G04100
Arabidopsis thaliana
5.0e-33
144.1
470
26.8
AT4G21903
Arabidopsis thaliana
5.0e-33
144.1
469
24.7
AT1G15180
Arabidopsis thaliana
6.6e-33
143.7
455
25.7
AT1G15170
Arabidopsis thaliana
8.6e-33
143.3
447
25.7
AT3G23560
Arabidopsis thaliana
1.9e-32
142.1
433
26.8
AT1G66760
Arabidopsis thaliana
4.3e-32
141.0
440
25.2
SPAC11D3.06
Schizosaccharomyces pombe
4.3e-32
141.0
446
26.2
SPCC4B3.13
Schizosaccharomyces pombe
9.5e-32
139.8
449
25.4
AT3G23550
Arabidopsis thaliana
3.6e-31
137.9
433
26.1
emh446400
Emiliania huxleyi
3.6e-31
137.9
477
26.2
emh230720
Emiliania huxleyi
3.6e-31
137.9
477
26.2
AT1G12950
Arabidopsis thaliana
8.0e-31
136.7
446
25.3
AT2G04080
Arabidopsis thaliana
8.0e-31
136.7
444
25.5
AT2G04050
Arabidopsis thaliana
2.3e-30
135.2
442
25.8
Cre01.g027764
Chlamydomonas reinhardtii
2.3e-30
135.2
446
25.8
AT4G21910
Arabidopsis thaliana
3.0e-30
134.8
469
24.1
AT2G04040
Arabidopsis thaliana
2.0e-29
132.1
462
26.4
tho116900
Thalassiosira oceanica
2.0e-29
132.1
502
24.7
AT4G25640
Arabidopsis thaliana
7.5e-29
130.2
423
24.3
tps31150
Thalassiosira pseudonana
7.5e-29
130.2
420
24.0
CC00G60790
Cyclotella cryptica
9.8e-29
129.8
490
23.7
AT4G00350
Arabidopsis thaliana
2.2e-28
128.6
426
24.9
AT5G38030
Arabidopsis thaliana
2.9e-28
128.3
441
25.9
AT2G04090
Arabidopsis thaliana
2.4e-27
125.2
470
24.5
Cre12.g499700
Chlamydomonas reinhardtii
7.0e-27
123.6
448
23.4
AT2G04070
Arabidopsis thaliana
9.2e-27
123.2
443
25.7
AT1G47530
Arabidopsis thaliana
2.0e-26
122.1
443
25.1
AT4G29140
Arabidopsis thaliana
4.6e-26
120.9
444
24.1
Cre01.g007901
Chlamydomonas reinhardtii
1.3e-25
119.4
220
30.9
Cre12.g523250
Chlamydomonas reinhardtii
3.3e-24
114.8
441
26.1
AT5G52050
Arabidopsis thaliana
9.5e-24
113.2
462
22.9
Pp3c1_37630
Physcomitrella patens
2.1e-23
112.1
308
27.3
AT1G58340
Arabidopsis thaliana
8.0e-23
110.2
474
23.4
Cre01.g014150
Chlamydomonas reinhardtii
8.0e-23
110.2
456
24.8
AT3G03620
Arabidopsis thaliana
1.5e-21
105.9
445
22.5
emh425820
Emiliania huxleyi
1.5e-21
105.9
440
22.7
YHR032W
Saccharomyces cerevisiae strain S288C
2.9e-20
101.7
376
25.0
sya00G08940
Synedra acus
3.7e-20
101.3
528
23.5
tho486100
Thalassiosira oceanica
2.4e-19
98.6
366
23.0
gene1184
Fragilariopsis cylindrus
7.8e-18
93.6
456
24.3
CM09G02580
Cyanidioschyzon merolae
3.9e-17
91.3
535
22.2
fso134100
Fistulifera solaris
5.0e-17
90.9
406
24.1
Sro400_g135060
Seminavis robusta
8.6e-17
90.1
428
22.9
Sro1515_g279010
Seminavis robusta
8.6e-17
90.1
498
23.3
pte106630
Paramecium tetraurelia
1.2e-15
86.3
393
21.4
gene14863
Fragilariopsis cylindrus
8.1e-15
83.6
399
24.8
ptri147330
Phaeodactylum tricornutum
5.2e-14
80.9
452
24.3
ptri92650
Phaeodactylum tricornutum
6.8e-14
80.5
436
23.6
AT4G22790
Arabidopsis thaliana
7.5e-13
77.0
441
20.9
CC00G106900
Cyclotella cryptica
1.7e-12
75.9
473
21.6
gene15027
Fragilariopsis cylindrus
2.4e-11
72.0
374
23.3
tho117820
Thalassiosira oceanica
1.2e-10
69.7
241
24.1
tho242420
Thalassiosira oceanica
3.5e-10
68.2
384
22.1
fso169670
Fistulifera solaris
1.0e-09
66.6
469
22.4
gene2933
Fragilariopsis cylindrus
3.0e-09
65.1
189
27.5
fso84030
Fistulifera solaris
1.6e-07
59.3
353
24.1
emh123000
Emiliania huxleyi
6.2e-07
57.4
394
22.8
Cre03.g205850
Chlamydomonas reinhardtii
1.4e-06
56.2
204
20.1
emh362920
Emiliania huxleyi
1.8e-06
55.8
389
23.1
gene6644
Fragilariopsis cylindrus
4.0e-06
54.7
439
22.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (31 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (3 genes)
Synedra acus (1 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (8 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing