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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G109250
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G109250
Cyclotella cryptica
0.0e+00
5330.8
2712
100.0
tps162180
Thalassiosira pseudonana
0.0e+00
2446.4
2788
51.3
Sro430_g141370
Seminavis robusta
0.0e+00
1550.0
2660
38.4
fso22080
Fistulifera solaris
0.0e+00
1518.8
2597
37.7
ptri25880
Phaeodactylum tricornutum
0.0e+00
1507.3
2728
37.1
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
0.0e+00
1503.0
2625
37.6
fso131290
Fistulifera solaris
0.0e+00
1500.3
2600
37.3
sya00G39620
Synedra acus
0.0e+00
1193.3
1893
39.4
Sro1087_g239810
Seminavis robusta
0.0e+00
1160.6
2590
32.6
tho249240
Thalassiosira oceanica
0.0e+00
1078.9
1527
42.5
ps00G146680
Pseudo-nitzschia multiseries
1.1e-136
490.7
906
36.9
gene4450
Fragilariopsis cylindrus
7.7e-133
478.0
902
37.0
gene16175
Fragilariopsis cylindrus
5.0e-132
475.3
899
37.0
Naga_100073g7
Nannochloropsis gaditana
5.1e-68
262.7
2797
21.7
ps00G146690
Pseudo-nitzschia multiseries
1.6e-42
177.9
232
42.2
Ec-11_002810
Ectocarpus siliculosus
4.2e-38
163.3
1398
21.1
ps00G146700
Pseudo-nitzschia multiseries
1.6e-37
161.4
101
69.3
Naga_100023g38
Nannochloropsis gaditana
2.6e-24
117.5
1829
21.7
sya00G33970
Synedra acus
2.1e-21
107.8
68
67.6
fso117180
Fistulifera solaris
3.0e-20
104.0
1526
20.7
fso50450
Fistulifera solaris
9.7e-19
99.0
493
21.9
ps00G39060
Pseudo-nitzschia multiseries
2.2e-18
97.8
1362
21.4
CC00G17000
Cyclotella cryptica
2.8e-18
97.4
179
35.2
sya00G187300
Synedra acus
6.3e-18
96.3
100
45.0
tps205130
Thalassiosira pseudonana
1.8e-17
94.7
110
46.4
gene6541
Fragilariopsis cylindrus
5.3e-17
93.2
226
31.9
PSNMU-V1.4_AUG-EV-PASAV3_0065810
Pseudo-nitzschia multistriata
1.5e-16
91.7
527
24.1
tho145400
Thalassiosira oceanica
1.5e-16
91.7
180
32.2
ptri97370
Phaeodactylum tricornutum
5.9e-16
89.7
159
35.8
sya00G61890
Synedra acus
5.9e-16
89.7
157
36.9
sya00G144450
Synedra acus
5.9e-16
89.7
157
36.9
Sro397_g134430
Seminavis robusta
1.0e-15
89.0
56
60.7
Sro397_g134410
Seminavis robusta
5.0e-15
86.7
97
46.4
Pp3c3_37220
Physcomitrella patens
2.3e-12
77.8
154
33.8
Pp3c10_20380
Physcomitrella patens
3.9e-12
77.0
153
34.0
Pp3c3_24510
Physcomitrella patens
8.8e-12
75.9
155
33.5
Ec-21_002440
Ectocarpus siliculosus
3.3e-11
73.9
191
31.9
emh202550
Emiliania huxleyi
1.7e-10
71.6
58
50.0
emh05340
Emiliania huxleyi
1.7e-10
71.6
58
50.0
emh641100
Emiliania huxleyi
4.8e-10
70.1
148
37.8
ENSG00000144357
Homo sapiens
1.8e-09
68.2
129
32.6
Pp3c8_2940
Physcomitrella patens
5.3e-09
66.6
152
31.6
Pp3c8_2930
Physcomitrella patens
5.3e-09
66.6
152
31.6
Pp3c9_4700
Physcomitrella patens
5.3e-09
66.6
76
36.8
AT5G02310
Arabidopsis thaliana
1.6e-08
65.1
57
45.6
gsu119960
Galdieria sulphuraria
2.6e-08
64.3
61
44.3
Pp3c15_3560
Physcomitrella patens
3.5e-08
63.9
54
40.7
Pp3c2_29090
Physcomitrella patens
3.5e-08
63.9
54
40.7
WBGene00016326
Caenorhabditis elegans
4.5e-08
63.5
138
29.7
Pp3c17_2850
Physcomitrella patens
7.7e-08
62.8
54
40.7
Pp3c7_22570
Physcomitrella patens
1.0e-07
62.4
54
38.9
ccr96920
Chondrus crispus
3.8e-07
60.5
391
23.3
SPAC15A10.11
Schizosaccharomyces pombe
8.5e-07
59.3
103
33.0
emh55720
Emiliania huxleyi
1.5e-06
58.5
60
41.7
Sro9_g007120
Seminavis robusta
9.4e-06
55.8
148
29.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (5 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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