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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G109190
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G109190
Cyclotella cryptica
0.0e+00
1830.5
915
100.0
tps144930
Thalassiosira pseudonana
0.0e+00
1259.2
841
76.8
tho107100
Thalassiosira oceanica
0.0e+00
1166.0
954
66.7
fso30680
Fistulifera solaris
0.0e+00
1087.4
833
66.3
sya00G162990
Synedra acus
0.0e+00
1078.5
861
64.7
ps00G68260
Pseudo-nitzschia multiseries
5.1e-312
1071.6
871
63.9
gene6322
Fragilariopsis cylindrus
1.4e-309
1063.5
808
66.7
PSNMU-V1.4_AUG-EV-PASAV3_0064210
Pseudo-nitzschia multistriata
2.0e-306
1053.1
812
66.5
fso119370
Fistulifera solaris
3.7e-305
1048.9
789
67.3
Sro785_g202090
Seminavis robusta
7.9e-300
1031.2
867
61.9
ptri146410
Phaeodactylum tricornutum
5.9e-263
908.7
748
63.5
Naga_100108g10
Nannochloropsis gaditana
7.8e-247
855.1
960
48.9
CM13G03230
Cyanidioschyzon merolae
4.0e-243
842.8
847
51.8
gsu84250
Galdieria sulphuraria
1.5e-242
840.9
809
53.3
WBGene00004391
Caenorhabditis elegans
2.6e-242
840.1
839
51.6
ccr33860
Chondrus crispus
6.4e-241
835.5
839
51.1
Pp3c6_14810
Physcomitrella patens
1.1e-237
824.7
871
49.4
AA0021G00710
Aureococcus anophagefferens
1.9e-237
823.9
842
52.1
sya00G221940
Synedra acus
2.5e-237
823.5
864
50.5
Pp3c5_8430
Physcomitrella patens
4.3e-237
822.8
867
49.0
AA0009G03050
Aureococcus anophagefferens
5.6e-237
822.4
843
51.8
gene13281
Fragilariopsis cylindrus
1.2e-236
821.2
825
52.0
AA0006G00950
Aureococcus anophagefferens
2.1e-236
820.5
842
51.7
ENSG00000167325
Homo sapiens
8.1e-236
818.5
805
51.8
AT2G21790
Arabidopsis thaliana
3.1e-235
816.6
840
50.7
Naga_100034g6
Nannochloropsis gaditana
1.5e-234
814.3
841
50.4
PSNMU-V1.4_AUG-EV-PASAV3_0005380
Pseudo-nitzschia multistriata
2.0e-234
813.9
823
52.2
SPAC1F7.05
Schizosaccharomyces pombe
5.8e-234
812.4
804
51.6
Cre12.g492950
Chlamydomonas reinhardtii
1.3e-233
811.2
827
51.3
fso18700
Fistulifera solaris
2.2e-233
810.4
854
49.6
fso45240
Fistulifera solaris
4.9e-233
809.3
854
49.6
CC00G39370
Cyclotella cryptica
4.2e-232
806.2
865
48.7
Ec-21_002920
Ectocarpus siliculosus
4.2e-232
806.2
852
50.5
ps00G07360
Pseudo-nitzschia multiseries
7.1e-232
805.4
829
51.6
FBgn0011703
Drosophila melanogaster
2.1e-231
803.9
824
48.8
tps128970
Thalassiosira pseudonana
1.7e-230
800.8
827
49.7
YER070W
Saccharomyces cerevisiae strain S288C
2.3e-230
800.4
812
51.0
ptri219800
Phaeodactylum tricornutum
3.9e-230
799.7
868
47.7
Sro399_g134840
Seminavis robusta
6.6e-230
798.9
821
51.2
YIL066C
Saccharomyces cerevisiae strain S288C
3.1e-227
790.0
812
50.1
tho73320
Thalassiosira oceanica
3.1e-227
790.0
781
51.3
pte663260
Paramecium tetraurelia
9.9e-218
758.4
811
49.1
Ec-11_002180
Ectocarpus siliculosus
4.0e-211
736.5
704
54.0
pte753340
Paramecium tetraurelia
4.8e-204
713.0
585
58.3
Ec-06_005120
Ectocarpus siliculosus
4.3e-189
663.3
829
45.1
gene2100
Fragilariopsis cylindrus
2.9e-185
650.6
819
44.2
emh680610
Emiliania huxleyi
6.5e-185
649.4
800
45.1
emh517270
Emiliania huxleyi
6.1e-151
536.6
452
59.1
AA0016G01460
Aureococcus anophagefferens
7.5e-133
476.5
475
52.2
AA0644G00010
Aureococcus anophagefferens
2.8e-119
431.4
368
58.4
gsu05760
Galdieria sulphuraria
5.3e-102
374.0
583
38.4
emh07130
Emiliania huxleyi
2.2e-55
219.2
247
47.4
AA0044G00360
Aureococcus anophagefferens
1.0e-52
210.3
239
48.5
ptri146390
Phaeodactylum tricornutum
7.2e-43
177.6
105
80.0
Ec-17_003700
Ectocarpus siliculosus
8.0e-42
174.1
270
39.6
emh48490
Emiliania huxleyi
1.0e-33
147.1
283
33.9
Pp3c22_3180
Physcomitrella patens
6.8e-33
144.4
123
52.8
sya00G266120
Synedra acus
1.4e-30
136.7
615
24.6
emh417920
Emiliania huxleyi
4.1e-30
135.2
159
44.0
AA0044G00350
Aureococcus anophagefferens
1.1e-27
127.1
85
62.4
tho243460
Thalassiosira oceanica
4.7e-26
121.7
97
69.1
Pp3c22_4130
Physcomitrella patens
4.1e-14
82.0
61
57.4
pte753360
Paramecium tetraurelia
1.9e-11
73.2
150
34.7
AA0009G03030
Aureococcus anophagefferens
1.4e-09
67.0
147
32.0
ps00G85260
Pseudo-nitzschia multiseries
6.8e-09
64.7
79
44.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (8 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing