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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G104590
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G104590
Cyclotella cryptica
0.0e+00
3353.9
1687
100.0
Sro2_g001820
Seminavis robusta
1.5e-198
695.7
1362
36.7
ptri196930
Phaeodactylum tricornutum
4.9e-170
600.9
1348
34.5
gene16554
Fragilariopsis cylindrus
6.0e-152
540.8
1124
35.4
sya00G250500
Synedra acus
9.3e-121
437.2
1135
31.6
PSNMU-V1.4_AUG-EV-PASAV3_0089050
Pseudo-nitzschia multistriata
6.1e-120
434.5
1100
32.1
ps00G53220
Pseudo-nitzschia multiseries
1.8e-116
422.9
1230
30.7
fso154340
Fistulifera solaris
3.8e-114
415.2
489
47.4
fso101080
Fistulifera solaris
1.2e-112
410.2
462
48.1
tps36580
Thalassiosira pseudonana
2.8e-101
372.5
318
61.0
ENSG00000164654
Homo sapiens
1.9e-44
183.7
600
26.0
tho590640
Thalassiosira oceanica
2.3e-42
176.8
111
69.4
FBgn0031399
Drosophila melanogaster
1.9e-41
173.7
460
26.1
YBL104C
Saccharomyces cerevisiae strain S288C
3.2e-36
156.4
578
24.9
SPAC12G12.01c
Schizosaccharomyces pombe
3.5e-35
152.9
451
27.7
emh273490
Emiliania huxleyi
3.9e-18
96.3
151
33.8
emh127370
Emiliania huxleyi
1.9e-12
77.4
272
24.3
CC00G166530
Cyclotella cryptica
1.0e-10
71.6
101
28.7
CC00G101630
Cyclotella cryptica
9.7e-09
65.1
87
31.0
CC00G192870
Cyclotella cryptica
9.7e-09
65.1
87
31.0
CC00G108710
Cyclotella cryptica
3.7e-08
63.2
89
31.5
CC00G37020
Cyclotella cryptica
4.8e-08
62.8
106
25.5
CC00G03420
Cyclotella cryptica
4.1e-07
59.7
98
26.5
CC00G120440
Cyclotella cryptica
4.1e-07
59.7
86
29.1
CC00G206940
Cyclotella cryptica
5.3e-07
59.3
100
32.0
CC00G119610
Cyclotella cryptica
1.0e-05
55.1
90
25.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (10 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing