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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G03130
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G03130
Cyclotella cryptica
9.8e-161
567.4
277
100.0
tho277000
Thalassiosira oceanica
1.6e-115
417.2
224
86.6
tps03190
Thalassiosira pseudonana
2.6e-113
409.8
224
86.6
ps00G86570
Pseudo-nitzschia multiseries
7.9e-102
371.7
224
77.7
PSNMU-V1.4_AUG-EV-PASAV3_0057390
Pseudo-nitzschia multistriata
3.9e-101
369.4
224
77.2
gene3644
Fragilariopsis cylindrus
1.5e-100
367.5
223
76.2
gene4605
Fragilariopsis cylindrus
3.3e-100
366.3
224
75.9
tho55100
Thalassiosira oceanica
1.2e-94
347.8
228
71.1
CC00G120080
Cyclotella cryptica
1.4e-93
344.4
231
70.1
tps171490
Thalassiosira pseudonana
5.7e-92
339.0
214
72.0
emh464180
Emiliania huxleyi
1.2e-86
321.2
238
62.6
fso172170
Fistulifera solaris
2.7e-78
293.5
210
65.7
Pp3c5_15740
Physcomitrella patens
1.8e-77
290.8
223
64.6
fso157450
Fistulifera solaris
2.3e-77
290.4
209
65.6
ptri121100
Phaeodactylum tricornutum
7.5e-76
285.4
208
64.4
Naga_100002g38
Nannochloropsis gaditana
1.3e-75
284.6
210
60.0
sya00G259610
Synedra acus
3.1e-74
280.0
220
60.5
Ec-06_008260
Ectocarpus siliculosus
4.1e-74
279.6
229
56.3
AT3G58140
Arabidopsis thaliana
9.1e-74
278.5
222
59.9
Cre02.g079600
Chlamydomonas reinhardtii
1.5e-71
271.2
206
60.2
Sro87_g046210
Seminavis robusta
3.6e-70
266.5
215
59.1
pte225520
Paramecium tetraurelia
1.7e-64
247.7
206
55.8
gsu127820
Galdieria sulphuraria
2.9e-64
246.9
210
56.2
ENSG00000145982
Homo sapiens
2.9e-64
246.9
209
56.9
ccr92820
Chondrus crispus
4.4e-60
233.0
225
50.2
SPCC736.03c
Schizosaccharomyces pombe
4.9e-59
229.6
225
50.7
CM17G03540
Cyanidioschyzon merolae
3.5e-57
223.4
255
45.9
YPR047W
Saccharomyces cerevisiae strain S288C
8.6e-56
218.8
198
50.5
FBgn0020766
Drosophila melanogaster
4.0e-53
209.9
215
46.0
WBGene00013361
Caenorhabditis elegans
5.2e-53
209.5
238
45.4
emh642020
Emiliania huxleyi
3.2e-42
173.7
237
43.0
Ec-15_003330
Ectocarpus siliculosus
1.5e-20
101.7
103
45.6
ENSG00000255561
Homo sapiens
1.5e-20
101.7
137
35.8
ptri229970
Phaeodactylum tricornutum
1.7e-19
98.2
103
45.6
Sro174_g076640
Seminavis robusta
7.1e-18
92.8
103
45.6
ccr112980
Chondrus crispus
1.2e-17
92.0
103
43.7
fso53830
Fistulifera solaris
2.7e-17
90.9
103
40.8
fso129470
Fistulifera solaris
2.7e-17
90.9
103
40.8
sya00G258880
Synedra acus
3.9e-16
87.0
103
42.7
sya00G184200
Synedra acus
1.1e-10
68.9
115
34.8
Sro51_chlor_g029430
Seminavis robusta
4.8e-06
53.5
121
24.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing