Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G02270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G02270
Cyclotella cryptica
0.0e+00
1764.2
870
100.0
CC00G151470
Cyclotella cryptica
0.0e+00
1764.2
870
100.0
tho66880
Thalassiosira oceanica
0.0e+00
1227.6
876
70.0
tps168550
Thalassiosira pseudonana
0.0e+00
1182.5
788
74.7
Sro50_g028940
Seminavis robusta
4.4e-284
978.8
899
57.0
ptri197590
Phaeodactylum tricornutum
1.4e-274
947.2
886
56.3
ps00G46980
Pseudo-nitzschia multiseries
2.8e-270
932.9
879
56.9
fso150670
Fistulifera solaris
5.5e-250
865.5
884
53.6
fso156050
Fistulifera solaris
5.1e-248
859.0
885
53.8
gene8079
Fragilariopsis cylindrus
2.0e-247
857.1
745
60.8
sya00G29320
Synedra acus
1.7e-174
614.8
605
53.6
ccr105840
Chondrus crispus
5.8e-151
536.6
873
39.1
Naga_100086g18
Nannochloropsis gaditana
5.8e-151
536.6
930
37.2
sya00G10270
Synedra acus
1.2e-140
502.3
508
52.4
ENSG00000111667
Homo sapiens
2.4e-136
488.0
908
35.1
sya00G212090
Synedra acus
9.0e-136
486.1
486
52.5
AA0005G03970
Aureococcus anophagefferens
2.0e-135
485.0
874
38.6
Cre02.g080350
Chlamydomonas reinhardtii
2.0e-135
485.0
948
35.2
emh700200
Emiliania huxleyi
1.3e-129
465.7
869
36.4
AT3G20630
Arabidopsis thaliana
6.1e-124
446.8
861
34.4
Pp3c19_17130
Physcomitrella patens
8.8e-123
443.0
866
34.9
FBgn0035402
Drosophila melanogaster
1.8e-115
418.7
866
33.9
Ec-15_000480
Ectocarpus siliculosus
3.6e-108
394.4
624
38.5
ENSG00000058056
Homo sapiens
3.5e-103
377.9
889
31.0
WBGene00020839
Caenorhabditis elegans
6.6e-94
347.1
853
31.2
PSNMU-V1.4_AUG-EV-PASAV3_0104140
Pseudo-nitzschia multistriata
4.4e-82
307.8
279
58.4
SPBC6B1.06c
Schizosaccharomyces pombe
8.9e-75
283.5
728
33.2
pte41080
Paramecium tetraurelia
1.4e-64
249.6
713
29.9
pte431210
Paramecium tetraurelia
3.2e-64
248.4
677
31.3
YBR058C
Saccharomyces cerevisiae strain S288C
2.4e-56
222.2
879
27.6
CM20G00980
Cyanidioschyzon merolae
3.0e-38
162.2
847
23.1
sya00G187780
Synedra acus
1.3e-17
93.6
147
38.8
Ec-11_004710
Ectocarpus siliculosus
3.6e-07
58.9
102
34.3
Pp3c2_16680
Physcomitrella patens
7.9e-07
57.8
76
38.2
gsu64760
Galdieria sulphuraria
1.0e-06
57.4
59
45.8
gsu78970
Galdieria sulphuraria
3.9e-06
55.5
65
33.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (4 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing