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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G01940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G01940
Cyclotella cryptica
2.3e-131
469.5
225
100.0
tps229470
Thalassiosira pseudonana
6.1e-52
205.7
164
59.1
CC00G198660
Cyclotella cryptica
5.0e-46
186.0
160
55.6
tho27000
Thalassiosira oceanica
9.5e-37
155.2
166
47.6
tho391180
Thalassiosira oceanica
8.0e-36
152.1
168
47.0
tho122860
Thalassiosira oceanica
1.3e-33
144.8
175
42.3
tho325920
Thalassiosira oceanica
1.3e-33
144.8
175
42.3
sya00G234780
Synedra acus
5.4e-32
139.4
165
44.8
sya00G261120
Synedra acus
1.0e-30
135.2
169
42.6
sya00G234800
Synedra acus
9.5e-29
128.6
165
41.2
Sro14_g010800
Seminavis robusta
7.5e-26
119.0
150
38.7
Sro857_g211650
Seminavis robusta
4.9e-25
116.3
168
39.9
CC00G114280
Cyclotella cryptica
7.0e-24
112.5
52
94.2
PSNMU-V1.4_AUG-EV-PASAV3_0073570
Pseudo-nitzschia multistriata
1.5e-13
78.2
219
29.2
tps228330
Thalassiosira pseudonana
1.5e-13
78.2
84
46.4
gene2505
Fragilariopsis cylindrus
3.6e-12
73.6
214
28.5
ENSG00000091704
Homo sapiens
2.3e-11
70.9
148
32.4
ps00G158930
Pseudo-nitzschia multiseries
3.1e-11
70.5
124
38.7
ENSG00000158516
Homo sapiens
1.2e-10
68.6
161
28.6
WBGene00020281
Caenorhabditis elegans
2.6e-10
67.4
162
29.0
gene3338
Fragilariopsis cylindrus
1.9e-08
61.2
87
42.5
ENSG00000158525
Homo sapiens
2.4e-08
60.8
150
30.0
tho670220
Thalassiosira oceanica
2.1e-07
57.8
77
41.6
tho672220
Thalassiosira oceanica
1.7e-06
54.7
46
52.2
FBgn0004648
Drosophila melanogaster
6.6e-06
52.8
117
28.2
tho133420
Thalassiosira oceanica
6.6e-06
52.8
91
34.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (7 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing