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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G64050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G64050
Arabidopsis thaliana
0.0e+00
1145.2
571
100.0
Pp3c1_10010
Physcomitrella patens
6.4e-207
721.8
522
66.7
Cre07.g313700
Chlamydomonas reinhardtii
1.9e-174
614.0
514
56.2
Ec-15_002360
Ectocarpus siliculosus
3.0e-156
553.5
493
55.0
ccr154120
Chondrus crispus
3.6e-149
530.0
521
51.6
Naga_100018g48
Nannochloropsis gaditana
1.3e-146
521.5
502
53.6
gsu80310
Galdieria sulphuraria
2.8e-138
493.8
509
49.5
CM19G01920
Cyanidioschyzon merolae
7.8e-136
485.7
551
46.6
AA0024G00230
Aureococcus anophagefferens
1.9e-129
464.5
518
48.3
AA0030G00240
Aureococcus anophagefferens
3.2e-129
463.8
519
48.6
ps00G84740
Pseudo-nitzschia multiseries
2.8e-125
450.7
531
46.5
Sro20_g014070
Seminavis robusta
1.4e-124
448.4
540
44.3
tps84830
Thalassiosira pseudonana
1.8e-124
448.0
522
46.4
PSNMU-V1.4_AUG-EV-PASAV3_0099320
Pseudo-nitzschia multistriata
5.2e-124
446.4
529
45.4
gene18232
Fragilariopsis cylindrus
7.5e-123
442.6
563
44.8
tho161400
Thalassiosira oceanica
1.4e-121
438.3
556
43.3
sya00G56360
Synedra acus
1.7e-119
431.4
541
44.4
emh572500
Emiliania huxleyi
1.4e-116
421.8
489
46.0
fso39700
Fistulifera solaris
2.6e-115
417.5
555
42.9
ptri18330
Phaeodactylum tricornutum
3.4e-115
417.2
538
42.9
fso109630
Fistulifera solaris
4.4e-115
416.8
555
42.3
CC00G49800
Cyclotella cryptica
4.9e-114
413.3
536
43.5
emh131730
Emiliania huxleyi
6.8e-108
392.9
471
45.4
FBgn0036629
Drosophila melanogaster
2.8e-69
264.6
482
35.3
SPAPB1A10.11c
Schizosaccharomyces pombe
3.8e-66
254.2
391
35.5
WBGene00001338
Caenorhabditis elegans
1.4e-60
235.7
320
39.1
ENSG00000103356
Homo sapiens
2.0e-59
231.9
346
39.3
YOL033W
Saccharomyces cerevisiae strain S288C
1.7e-58
228.8
352
37.2
sya00G168530
Synedra acus
8.8e-55
216.5
490
32.7
AA0002G03570
Aureococcus anophagefferens
1.3e-50
202.6
269
43.1
Pp3c2_37890
Physcomitrella patens
1.2e-32
142.9
244
37.3
sya00G269110
Synedra acus
4.9e-21
104.4
271
28.8
YGL245W
Saccharomyces cerevisiae strain S288C
1.6e-16
89.4
271
27.3
Ec-06_008480
Ectocarpus siliculosus
2.2e-13
79.0
286
25.2
SPAC17A5.15c
Schizosaccharomyces pombe
2.2e-13
79.0
259
23.9
Naga_100001g200
Nannochloropsis gaditana
1.1e-12
76.6
217
26.3
ccr98860
Chondrus crispus
9.2e-12
73.6
264
25.4
gsu98090
Galdieria sulphuraria
9.2e-12
73.6
242
25.6
gene8215
Fragilariopsis cylindrus
1.2e-11
73.2
231
23.4
ENSG00000136628
Homo sapiens
2.0e-11
72.4
264
24.6
pte731460
Paramecium tetraurelia
2.0e-11
72.4
232
23.3
AA0012G01690
Aureococcus anophagefferens
6.0e-11
70.9
285
23.9
ptri227370
Phaeodactylum tricornutum
6.0e-11
70.9
258
25.2
YOR168W
Saccharomyces cerevisiae strain S288C
6.0e-11
70.9
172
29.7
PSNMU-V1.4_AUG-EV-PASAV3_0110410
Pseudo-nitzschia multistriata
7.8e-11
70.5
217
23.5
emh310620
Emiliania huxleyi
1.7e-10
69.3
112
33.0
Sro151_g069130
Seminavis robusta
3.0e-10
68.6
234
24.8
ps00G105560
Pseudo-nitzschia multiseries
3.9e-10
68.2
231
23.8
sya00G196850
Synedra acus
1.9e-09
65.9
234
25.2
CC00G130280
Cyclotella cryptica
2.5e-09
65.5
239
24.7
sya00G52800
Synedra acus
2.5e-09
65.5
235
23.4
Pp3c25_11910
Physcomitrella patens
3.3e-09
65.1
218
24.3
ENSG00000172053
Homo sapiens
5.6e-09
64.3
117
31.6
pte96250
Paramecium tetraurelia
7.3e-09
63.9
119
33.6
Pp3c12_18480
Physcomitrella patens
1.2e-08
63.2
104
35.6
Pp3c12_18499
Physcomitrella patens
1.2e-08
63.2
104
35.6
tho254280
Thalassiosira oceanica
1.2e-08
63.2
228
23.2
CM03G00830
Cyanidioschyzon merolae
1.6e-08
62.8
230
23.9
Ec-10_000780
Ectocarpus siliculosus
1.6e-08
62.8
134
30.6
gene9896
Fragilariopsis cylindrus
1.6e-08
62.8
239
25.1
fso16330
Fistulifera solaris
1.6e-08
62.8
244
24.2
pte159360
Paramecium tetraurelia
1.6e-08
62.8
119
32.8
gene18729
Fragilariopsis cylindrus
2.1e-08
62.4
239
24.7
ptri04920
Phaeodactylum tricornutum
2.1e-08
62.4
114
34.2
tps54900
Thalassiosira pseudonana
2.8e-08
62.0
238
24.8
fso29000
Fistulifera solaris
3.6e-08
61.6
120
29.2
fso35220
Fistulifera solaris
3.6e-08
61.6
122
30.3
tps18610
Thalassiosira pseudonana
3.6e-08
61.6
235
22.1
WBGene00001337
Caenorhabditis elegans
4.7e-08
61.2
218
22.5
CC00G36090
Cyclotella cryptica
4.7e-08
61.2
246
23.6
fso125890
Fistulifera solaris
8.0e-08
60.5
248
23.4
AT5G26710
Arabidopsis thaliana
1.1e-07
60.1
104
32.7
WBGene00001336
Caenorhabditis elegans
1.4e-07
59.7
117
30.8
Sro110_g054990
Seminavis robusta
1.8e-07
59.3
234
24.8
tho156480
Thalassiosira oceanica
1.8e-07
59.3
128
32.0
CC00G104280
Cyclotella cryptica
3.1e-07
58.5
129
31.0
FBgn0005674
Drosophila melanogaster
3.1e-07
58.5
217
23.0
PSNMU-V1.4_AUG-EV-PASAV3_0018750
Pseudo-nitzschia multistriata
3.1e-07
58.5
115
31.3
Naga_100070g19
Nannochloropsis gaditana
5.2e-07
57.8
137
29.9
AA0001G02600
Aureococcus anophagefferens
6.8e-07
57.4
151
27.2
gsu77080
Galdieria sulphuraria
8.9e-07
57.0
119
28.6
ps00G189580
Pseudo-nitzschia multiseries
8.9e-07
57.0
118
30.5
FBgn0027090
Drosophila melanogaster
1.5e-06
56.2
117
29.1
gene11664
Fragilariopsis cylindrus
2.6e-06
55.5
132
28.8
PSNMU-V1.4_AUG-EV-PASAV3_0055320
Pseudo-nitzschia multistriata
3.4e-06
55.1
133
29.3
Cre11.g467547
Chlamydomonas reinhardtii
4.4e-06
54.7
70
37.1
ptri137750
Phaeodactylum tricornutum
4.4e-06
54.7
143
28.7
Cre14.g614900
Chlamydomonas reinhardtii
5.8e-06
54.3
122
27.0
AA0002G06550
Aureococcus anophagefferens
7.5e-06
53.9
64
37.5
Pp3c23_15390
Physcomitrella patens
7.5e-06
53.9
64
39.1
Sro1838_g300780
Seminavis robusta
7.5e-06
53.9
143
29.4
emh706130
Emiliania huxleyi
9.8e-06
53.5
119
32.8
ps00G23720
Pseudo-nitzschia multiseries
9.8e-06
53.5
133
28.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (5 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing