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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G61000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G61000
Arabidopsis thaliana
0.0e+00
1221.1
630
100.0
AT5G08020
Arabidopsis thaliana
7.4e-289
994.2
631
81.1
Pp3c1_20770
Physcomitrella patens
2.1e-142
507.7
482
51.0
AT2G06510
Arabidopsis thaliana
4.5e-84
313.9
652
32.8
Pp3c23_16880
Physcomitrella patens
4.9e-83
310.5
567
33.7
Pp3c20_10450
Physcomitrella patens
1.6e-81
305.4
467
35.5
ENSG00000132383
Homo sapiens
2.4e-77
291.6
611
32.7
AT4G19130
Arabidopsis thaliana
6.9e-77
290.0
459
35.1
AT5G45400
Arabidopsis thaliana
7.6e-76
286.6
462
34.6
Naga_100067g7
Nannochloropsis gaditana
3.8e-75
284.3
625
30.6
SPBC660.13c
Schizosaccharomyces pombe
3.7e-70
267.7
617
29.8
gsu10940
Galdieria sulphuraria
2.6e-68
261.5
635
28.5
YAR007C
Saccharomyces cerevisiae strain S288C
6.5e-67
256.9
582
30.8
FBgn0010173
Drosophila melanogaster
3.9e-64
247.7
605
30.1
CM03G01230
Cyanidioschyzon merolae
5.7e-63
243.8
624
28.4
ps00G126120
Pseudo-nitzschia multiseries
9.7e-63
243.0
636
26.9
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
4.8e-62
240.7
662
27.0
fso181940
Fistulifera solaris
6.9e-61
236.9
668
28.3
gene3215
Fragilariopsis cylindrus
1.7e-59
232.3
629
27.0
fso41110
Fistulifera solaris
6.5e-59
230.3
670
27.8
CC00G33490
Cyclotella cryptica
3.2e-58
228.0
655
27.3
tps198210
Thalassiosira pseudonana
2.7e-57
224.9
615
27.3
ccr116080
Chondrus crispus
1.8e-56
222.2
648
29.0
Cre16.g651000
Chlamydomonas reinhardtii
3.9e-56
221.1
619
25.8
ptri80280
Phaeodactylum tricornutum
8.8e-56
219.9
630
27.6
Sro773_g200410
Seminavis robusta
8.8e-56
219.9
457
31.1
AA0015G00520
Aureococcus anophagefferens
1.7e-54
215.7
442
32.8
emh418280
Emiliania huxleyi
2.8e-54
214.9
615
27.5
emh82610
Emiliania huxleyi
3.7e-54
214.5
615
27.5
sya00G127980
Synedra acus
6.5e-51
203.8
641
26.2
Cre17.g718850
Chlamydomonas reinhardtii
1.4e-50
202.6
459
29.8
Sro944_g222890
Seminavis robusta
2.5e-50
201.8
643
24.7
sya00G143960
Synedra acus
2.1e-49
198.7
640
26.9
AA0022G00030
Aureococcus anophagefferens
2.6e-47
191.8
369
32.5
tho401580
Thalassiosira oceanica
9.7e-47
189.9
450
27.6
gene19869
Fragilariopsis cylindrus
8.2e-46
186.8
555
26.8
WBGene00017546
Caenorhabditis elegans
2.3e-40
168.7
603
27.4
emh244200
Emiliania huxleyi
1.8e-37
159.1
446
28.3
pte565200
Paramecium tetraurelia
2.7e-33
145.2
451
26.2
pte321820
Paramecium tetraurelia
1.3e-30
136.3
447
25.5
pte570770
Paramecium tetraurelia
2.4e-29
132.1
447
25.7
AT1G52950
Arabidopsis thaliana
1.6e-17
92.8
418
23.4
pte664000
Paramecium tetraurelia
7.0e-13
77.4
428
20.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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