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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G54520
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G54520
Arabidopsis thaliana
2.0e-259
896.0
458
100.0
Pp3c11_840
Physcomitrella patens
1.1e-105
385.2
378
47.6
ENSG00000176473
Homo sapiens
2.8e-67
257.7
316
36.4
Ec-14_005040
Ectocarpus siliculosus
2.6e-49
198.0
312
32.7
AT1G10580
Arabidopsis thaliana
9.8e-49
196.1
313
32.6
PSNMU-V1.4_AUG-EV-PASAV3_0122660
Pseudo-nitzschia multistriata
2.4e-47
191.4
316
32.9
emh601940
Emiliania huxleyi
5.4e-47
190.3
319
32.0
AA0006G04420
Aureococcus anophagefferens
2.3e-45
184.9
314
28.7
ENSG00000168438
Homo sapiens
8.6e-45
183.0
313
30.7
Naga_100083g16
Nannochloropsis gaditana
1.1e-44
182.6
322
31.7
ps00G185950
Pseudo-nitzschia multiseries
1.6e-43
178.7
329
29.8
Pp3c5_27650
Physcomitrella patens
2.6e-41
171.4
321
29.3
SPBC6B1.10
Schizosaccharomyces pombe
2.6e-41
171.4
303
29.7
Cre04.g226450
Chlamydomonas reinhardtii
1.7e-40
168.7
323
30.7
pte45090
Paramecium tetraurelia
1.9e-39
165.2
314
28.0
pte590660
Paramecium tetraurelia
1.9e-39
165.2
314
28.0
gene6443
Fragilariopsis cylindrus
6.0e-38
160.2
316
29.7
ccr187540
Chondrus crispus
3.0e-37
157.9
315
29.5
FBgn0038927
Drosophila melanogaster
2.4e-34
148.3
304
28.0
YDR364C
Saccharomyces cerevisiae strain S288C
1.7e-32
142.1
354
26.6
WBGene00018625
Caenorhabditis elegans
2.9e-32
141.4
316
24.4
fso116370
Fistulifera solaris
2.6e-25
118.2
312
23.4
fso25530
Fistulifera solaris
4.4e-25
117.5
312
23.7
Sro9_g007550
Seminavis robusta
1.9e-23
112.1
140
34.3
gsu79810
Galdieria sulphuraria
4.2e-23
110.9
177
37.3
tps127330
Thalassiosira pseudonana
2.5e-20
101.7
137
32.8
ptri95520
Phaeodactylum tricornutum
6.2e-19
97.1
139
31.7
sya00G25820
Synedra acus
1.1e-18
96.3
139
30.2
tho75640
Thalassiosira oceanica
1.7e-16
89.0
138
28.3
Sro3059_g342930
Seminavis robusta
3.8e-16
87.8
332
24.4
AT5G43920
Arabidopsis thaliana
1.2e-14
82.8
309
23.6
gsu23080
Galdieria sulphuraria
1.6e-14
82.4
266
27.1
Pp3c15_21840
Physcomitrella patens
2.7e-14
81.6
329
24.0
pte449650
Paramecium tetraurelia
2.3e-13
78.6
301
22.3
Pp3c9_6000
Physcomitrella patens
8.7e-13
76.6
274
23.7
AT3G27640
Arabidopsis thaliana
5.6e-12
73.9
296
24.0
AT4G03020
Arabidopsis thaliana
9.6e-12
73.2
268
25.0
CC00G28730
Cyclotella cryptica
9.6e-12
73.2
175
22.9
AT4G28450
Arabidopsis thaliana
3.7e-11
71.2
277
22.4
ccr23600
Chondrus crispus
6.2e-11
70.5
297
24.9
Cre06.g255400
Chlamydomonas reinhardtii
6.2e-11
70.5
380
22.9
Pp3c10_3720
Physcomitrella patens
8.1e-11
70.1
260
24.2
FBgn0023527
Drosophila melanogaster
1.1e-10
69.7
174
28.2
Pp3c2_19830
Physcomitrella patens
1.1e-10
69.7
260
23.8
AT1G15470
Arabidopsis thaliana
1.4e-10
69.3
268
26.5
pte72440
Paramecium tetraurelia
1.4e-10
69.3
172
27.9
pte343410
Paramecium tetraurelia
2.4e-10
68.6
172
27.3
fso41210
Fistulifera solaris
3.1e-10
68.2
272
24.3
ENSG00000103091
Homo sapiens
3.1e-10
68.2
126
26.2
fso181840
Fistulifera solaris
5.3e-10
67.4
272
24.3
tps77780
Thalassiosira pseudonana
9.0e-10
66.6
248
23.8
FBgn0034876
Drosophila melanogaster
1.2e-09
66.2
291
21.6
gsu138690
Galdieria sulphuraria
1.2e-09
66.2
276
23.6
Pp3c21_5350
Physcomitrella patens
3.4e-09
64.7
335
21.2
Pp3c26_8130
Physcomitrella patens
4.5e-09
64.3
269
26.0
Pp3c3_13590
Physcomitrella patens
7.6e-09
63.5
264
24.6
ENSG00000023734
Homo sapiens
1.7e-08
62.4
305
22.3
AT1G80710
Arabidopsis thaliana
2.2e-08
62.0
158
25.3
fso119410
Fistulifera solaris
2.9e-08
61.6
175
25.1
ENSG00000105447
Homo sapiens
2.9e-08
61.6
215
24.2
ENSG00000071127
Homo sapiens
2.9e-08
61.6
208
26.0
SPAC23C4.02
Schizosaccharomyces pombe
2.9e-08
61.6
143
28.0
pte794010
Paramecium tetraurelia
3.8e-08
61.2
189
26.5
FBgn0033440
Drosophila melanogaster
4.9e-08
60.8
324
22.8
Ec-12_004590
Ectocarpus siliculosus
4.9e-08
60.8
178
25.3
ccr176000
Chondrus crispus
8.4e-08
60.1
151
29.1
pte727190
Paramecium tetraurelia
8.4e-08
60.1
176
27.3
FBgn0260049
Drosophila melanogaster
1.1e-07
59.7
180
26.1
Ec-17_002790
Ectocarpus siliculosus
1.1e-07
59.7
152
28.3
emh622180
Emiliania huxleyi
2.5e-07
58.5
306
22.5
Pp3c6_28640
Physcomitrella patens
2.5e-07
58.5
200
23.5
pte686960
Paramecium tetraurelia
2.5e-07
58.5
215
25.6
ENSG00000051596
Homo sapiens
4.2e-07
57.8
89
31.5
SPBC16A3.05c
Schizosaccharomyces pombe
4.2e-07
57.8
104
26.9
emh595350
Emiliania huxleyi
7.1e-07
57.0
306
22.5
gene7370
Fragilariopsis cylindrus
7.1e-07
57.0
240
22.1
gsu30210
Galdieria sulphuraria
7.1e-07
57.0
317
21.1
gsu30230
Galdieria sulphuraria
7.1e-07
57.0
317
21.1
pte254820
Paramecium tetraurelia
9.3e-07
56.6
170
28.2
ptri146510
Phaeodactylum tricornutum
9.3e-07
56.6
180
22.8
ptri147690
Phaeodactylum tricornutum
9.3e-07
56.6
143
28.7
tps54620
Thalassiosira pseudonana
9.3e-07
56.6
109
29.4
Cre06.g278176
Chlamydomonas reinhardtii
1.2e-06
56.2
70
35.7
FBgn0037943
Drosophila melanogaster
1.6e-06
55.8
110
25.5
gene6323
Fragilariopsis cylindrus
1.6e-06
55.8
154
22.7
FBgn0032339
Drosophila melanogaster
4.6e-06
54.3
179
20.7
gsu11720
Galdieria sulphuraria
4.6e-06
54.3
146
21.9
gsu11740
Galdieria sulphuraria
4.6e-06
54.3
146
21.9
ENSG00000085978
Homo sapiens
4.6e-06
54.3
196
26.5
ENSG00000281089
Homo sapiens
4.6e-06
54.3
196
26.5
ps00G68300
Pseudo-nitzschia multiseries
4.6e-06
54.3
154
22.1
PSNMU-V1.4_AUG-EV-PASAV3_0064250
Pseudo-nitzschia multistriata
7.9e-06
53.5
154
21.4
ptri188100
Phaeodactylum tricornutum
7.9e-06
53.5
101
31.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (9 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (7 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (9 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing