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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G54200
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G54200
Arabidopsis thaliana
0.0e+00
1490.3
792
100.0
AT3G15470
Arabidopsis thaliana
8.4e-208
725.3
816
51.5
AT2G37670
Arabidopsis thaliana
1.7e-123
445.3
829
37.6
Pp3c3_26050
Physcomitrella patens
3.6e-118
427.6
788
38.6
Pp3c12_17730
Physcomitrella patens
2.3e-112
408.3
773
37.5
AT5G02430
Arabidopsis thaliana
3.0e-112
407.9
653
40.7
Pp3c10_15710
Physcomitrella patens
1.1e-111
406.0
631
40.7
Pp3c4_14370
Physcomitrella patens
3.2e-106
387.9
780
35.8
Pp3c3_18790
Physcomitrella patens
1.1e-103
379.4
595
40.7
AT5G24320
Arabidopsis thaliana
7.1e-98
360.1
508
42.1
AT5G42010
Arabidopsis thaliana
1.0e-96
356.3
519
40.8
AT5G53500
Arabidopsis thaliana
5.1e-88
327.4
587
38.3
AT1G64610
Arabidopsis thaliana
1.2e-76
289.7
493
35.3
AT1G48870
Arabidopsis thaliana
1.3e-75
286.2
509
36.7
gsu66850
Galdieria sulphuraria
5.2e-56
221.1
450
34.7
ENSG00000131725
Homo sapiens
8.8e-56
220.3
496
31.7
WBGene00006369
Caenorhabditis elegans
9.1e-53
210.3
398
35.2
FBgn0083969
Drosophila melanogaster
3.0e-48
195.3
541
29.8
gsu104770
Galdieria sulphuraria
2.4e-45
185.7
348
33.6
gsu04410
Galdieria sulphuraria
4.1e-45
184.9
352
33.5
gsu04430
Galdieria sulphuraria
4.1e-45
184.9
352
33.5
SPBC18H10.05
Schizosaccharomyces pombe
4.1e-45
184.9
333
31.2
YMR102C
Saccharomyces cerevisiae strain S288C
5.5e-42
174.5
474
28.7
tps54620
Thalassiosira pseudonana
1.3e-38
163.3
399
29.6
Ec-02_006100
Ectocarpus siliculosus
2.8e-38
162.2
462
27.9
tho237360
Thalassiosira oceanica
5.4e-37
157.9
550
24.4
CC00G82030
Cyclotella cryptica
8.6e-35
150.6
350
31.1
CC00G152500
Cyclotella cryptica
8.6e-35
150.6
350
31.1
ccr128400
Chondrus crispus
7.2e-34
147.5
355
29.3
SPAC3H5.08c
Schizosaccharomyces pombe
2.8e-33
145.6
330
31.5
Cre06.g276100
Chlamydomonas reinhardtii
3.8e-27
125.2
442
23.8
Naga_100124g3
Nannochloropsis gaditana
4.7e-25
118.2
407
25.8
CM01G01250
Cyanidioschyzon merolae
6.1e-25
117.9
406
26.8
YKL121W
Saccharomyces cerevisiae strain S288C
1.0e-24
117.1
348
28.4
Ec-12_005860
Ectocarpus siliculosus
7.8e-20
100.9
457
24.1
ENSG00000135541
Homo sapiens
1.1e-18
97.1
220
29.5
Ec-02_002470
Ectocarpus siliculosus
4.4e-15
85.1
246
27.6
AT2G16405
Arabidopsis thaliana
4.6e-12
75.1
239
27.2
Pp3c21_5350
Physcomitrella patens
1.3e-11
73.6
227
26.4
Ec-14_000490
Ectocarpus siliculosus
2.5e-10
69.3
135
28.9
Pp3c15_21840
Physcomitrella patens
1.2e-09
67.0
250
23.2
ENSG00000138442
Homo sapiens
1.6e-09
66.6
177
22.6
gsu47420
Galdieria sulphuraria
6.2e-09
64.7
202
27.2
ENSG00000164091
Homo sapiens
1.4e-08
63.5
199
27.6
pte793530
Paramecium tetraurelia
1.4e-08
63.5
245
24.1
pte726850
Paramecium tetraurelia
2.3e-08
62.8
244
23.4
ENSG00000159259
Homo sapiens
3.1e-08
62.4
184
25.0
CM19G02410
Cyanidioschyzon merolae
5.2e-08
61.6
182
22.0
fso87290
Fistulifera solaris
5.2e-08
61.6
106
38.7
fso156180
Fistulifera solaris
5.2e-08
61.6
106
38.7
SPBC31F10.13c
Schizosaccharomyces pombe
5.2e-08
61.6
197
25.9
WBGene00017435
Caenorhabditis elegans
1.2e-07
60.5
210
26.2
ENSG00000143207
Homo sapiens
1.2e-07
60.5
209
28.2
Pp3c11_840
Physcomitrella patens
1.2e-07
60.5
220
25.0
pte602220
Paramecium tetraurelia
1.5e-07
60.1
240
22.5
Ec-14_005040
Ectocarpus siliculosus
2.0e-07
59.7
241
23.7
FBgn0032030
Drosophila melanogaster
2.6e-07
59.3
207
26.6
FBgn0033440
Drosophila melanogaster
3.4e-07
58.9
224
24.6
pte668240
Paramecium tetraurelia
3.4e-07
58.9
240
23.3
SPBC6B1.10
Schizosaccharomyces pombe
7.5e-07
57.8
91
33.0
Sro2353_g324440
Seminavis robusta
9.9e-07
57.4
153
24.2
AT4G32551
Arabidopsis thaliana
1.3e-06
57.0
83
39.8
CM05G00440
Cyanidioschyzon merolae
2.2e-06
56.2
124
32.3
Sro795_g203560
Seminavis robusta
2.2e-06
56.2
182
23.1
fso02620
Fistulifera solaris
2.9e-06
55.8
247
25.9
PSNMU-V1.4_AUG-EV-PASAV3_0122660
Pseudo-nitzschia multistriata
2.9e-06
55.8
221
22.2
ps00G185950
Pseudo-nitzschia multiseries
2.9e-06
55.8
231
20.8
sya00G70860
Synedra acus
2.9e-06
55.8
178
19.7
CC00G128680
Cyclotella cryptica
4.9e-06
55.1
137
29.2
Ec-12_006870
Ectocarpus siliculosus
4.9e-06
55.1
217
25.3
AT5G16750
Arabidopsis thaliana
8.3e-06
54.3
84
36.9
Pp3c2_24290
Physcomitrella patens
8.3e-06
54.3
205
24.9
sya00G253340
Synedra acus
8.3e-06
54.3
79
32.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (12 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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