Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G41570
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G41570
Arabidopsis thaliana
3.0e-102
372.5
180
100.0
AT1G64000
Arabidopsis thaliana
6.4e-60
231.9
194
67.0
AT2G46130
Arabidopsis thaliana
2.4e-38
160.2
99
70.7
AT5G13080
Arabidopsis thaliana
1.6e-31
137.5
106
64.2
AT4G18170
Arabidopsis thaliana
3.5e-26
119.8
94
60.6
AT2G44745
Arabidopsis thaliana
7.8e-26
118.6
90
57.8
Pp3c13_10830
Physcomitrella patens
2.3e-25
117.1
154
44.2
AT4G39410
Arabidopsis thaliana
5.1e-25
115.9
84
64.3
AT3G01970
Arabidopsis thaliana
2.5e-24
113.6
92
57.6
AT1G29860
Arabidopsis thaliana
1.6e-23
110.9
94
54.3
Pp3c4_26880
Physcomitrella patens
2.8e-23
110.2
85
61.2
Pp3c3_8830
Physcomitrella patens
3.6e-23
109.8
95
54.7
AT5G46350
Arabidopsis thaliana
4.8e-23
109.4
72
63.9
Pp3c21_11270
Physcomitrella patens
2.4e-22
107.1
82
61.0
Pp3c11_1790
Physcomitrella patens
3.1e-22
106.7
90
54.4
Pp3c2_23590
Physcomitrella patens
3.1e-22
106.7
76
61.8
AT5G49520
Arabidopsis thaliana
4.0e-22
106.3
71
66.2
Pp3c11_1840
Physcomitrella patens
5.3e-22
105.9
78
60.3
AT1G69310
Arabidopsis thaliana
1.2e-21
104.8
77
63.6
AT2G30250
Arabidopsis thaliana
1.2e-21
104.8
85
56.5
AT2G47260
Arabidopsis thaliana
1.2e-21
104.8
70
65.7
AT5G07100
Arabidopsis thaliana
1.5e-21
104.4
116
45.7
Pp3c7_24490
Physcomitrella patens
1.5e-21
104.4
100
47.0
AT1G13960
Arabidopsis thaliana
2.0e-21
104.0
71
66.2
AT2G03340
Arabidopsis thaliana
2.6e-21
103.6
100
51.0
Pp3c26_5095
Physcomitrella patens
2.6e-21
103.6
74
56.8
Pp3c26_5090
Physcomitrella patens
2.6e-21
103.6
74
56.8
Pp3c2_32160
Physcomitrella patens
2.6e-21
103.6
96
53.1
Pp3c22_12880
Physcomitrella patens
3.4e-21
103.2
71
60.6
Pp3c20_12200
Physcomitrella patens
3.4e-21
103.2
83
54.2
Pp3c3_27940
Physcomitrella patens
3.4e-21
103.2
76
60.5
Pp3c8_4400
Physcomitrella patens
3.4e-21
103.2
76
60.5
AT3G01080
Arabidopsis thaliana
5.8e-21
102.4
71
62.0
AT3G62340
Arabidopsis thaliana
5.8e-21
102.4
83
55.4
AT4G26640
Arabidopsis thaliana
5.8e-21
102.4
71
60.6
Pp3c24_7120
Physcomitrella patens
7.6e-21
102.1
84
56.0
Pp3c8_5110
Physcomitrella patens
7.6e-21
102.1
91
51.6
Pp3c19_3000
Physcomitrella patens
9.9e-21
101.7
82
57.3
Pp3c3_32860
Physcomitrella patens
9.9e-21
101.7
93
51.6
AT5G56270
Arabidopsis thaliana
1.7e-20
100.9
76
59.2
AT2G38470
Arabidopsis thaliana
2.9e-20
100.1
91
54.9
AT5G26170
Arabidopsis thaliana
2.9e-20
100.1
70
60.0
AT5G64810
Arabidopsis thaliana
4.9e-20
99.4
157
37.6
Pp3c23_10680
Physcomitrella patens
6.4e-20
99.0
84
54.8
AT1G55600
Arabidopsis thaliana
3.2e-19
96.7
77
57.1
Pp3c3_15040
Physcomitrella patens
3.2e-19
96.7
79
50.6
AT4G26440
Arabidopsis thaliana
4.2e-19
96.3
129
41.9
AT2G04880
Arabidopsis thaliana
2.1e-18
94.0
77
54.5
Pp3c12_4260
Physcomitrella patens
3.5e-18
93.2
72
58.3
AT2G21900
Arabidopsis thaliana
1.8e-17
90.9
97
45.4
Pp3c2_32150
Physcomitrella patens
5.1e-17
89.4
82
50.0
AT1G62300
Arabidopsis thaliana
6.7e-17
89.0
72
55.6
Pp3c13_15520
Physcomitrella patens
8.7e-17
88.6
72
55.6
Pp3c11_14240
Physcomitrella patens
8.7e-17
88.6
72
56.9
Pp3c3_21440
Physcomitrella patens
8.7e-17
88.6
72
56.9
AT1G80840
Arabidopsis thaliana
1.1e-16
88.2
99
44.4
AT4G04450
Arabidopsis thaliana
1.9e-16
87.4
72
55.6
AT4G22070
Arabidopsis thaliana
5.6e-16
85.9
72
54.2
AT4G30935
Arabidopsis thaliana
5.6e-16
85.9
90
43.3
AT1G68150
Arabidopsis thaliana
9.6e-16
85.1
82
45.1
AT5G43290
Arabidopsis thaliana
1.3e-15
84.7
81
46.9
AT1G18860
Arabidopsis thaliana
1.6e-15
84.3
87
44.8
AT5G15130
Arabidopsis thaliana
2.1e-15
84.0
113
42.5
Pp3c4_15559
Physcomitrella patens
3.7e-15
83.2
133
36.1
Cre04.g228400
Chlamydomonas reinhardtii
1.1e-14
81.6
58
58.6
AT2G37260
Arabidopsis thaliana
1.4e-14
81.3
55
61.8
AT4G31800
Arabidopsis thaliana
2.4e-14
80.5
76
50.0
AT2G25000
Arabidopsis thaliana
6.9e-14
79.0
57
59.6
AT2G24570
Arabidopsis thaliana
9.0e-14
78.6
107
36.4
Pp3c1_40230
Physcomitrella patens
9.0e-14
78.6
86
44.2
AT4G31550
Arabidopsis thaliana
1.5e-13
77.8
96
38.5
AT2G23320
Arabidopsis thaliana
2.6e-13
77.0
85
43.5
Pp3c2_2510
Physcomitrella patens
2.6e-13
77.0
86
43.0
AT3G04670
Arabidopsis thaliana
7.6e-13
75.5
85
43.5
Pp3c7_7550
Physcomitrella patens
1.0e-12
75.1
85
43.5
AT1G69810
Arabidopsis thaliana
1.7e-12
74.3
84
44.0
AT2G34830
Arabidopsis thaliana
2.9e-12
73.6
91
41.8
AT2G30590
Arabidopsis thaliana
3.8e-12
73.2
86
40.7
AT5G28650
Arabidopsis thaliana
3.8e-12
73.2
78
44.9
Pp3c14_17020
Physcomitrella patens
3.8e-12
73.2
86
41.9
AT1G30650
Arabidopsis thaliana
8.4e-12
72.0
132
34.1
AT5G22570
Arabidopsis thaliana
8.4e-12
72.0
75
45.3
Pp3c17_19970
Physcomitrella patens
1.1e-11
71.6
85
41.2
AT4G24240
Arabidopsis thaliana
2.5e-11
70.5
90
36.7
AT5G52830
Arabidopsis thaliana
2.5e-11
70.5
79
41.8
AT5G45050
Arabidopsis thaliana
3.2e-11
70.1
94
43.6
AT1G66550
Arabidopsis thaliana
7.1e-11
68.9
58
53.4
AT2G46400
Arabidopsis thaliana
1.2e-10
68.2
92
38.0
AT5G45260
Arabidopsis thaliana
1.2e-10
68.2
93
40.9
AT5G01900
Arabidopsis thaliana
1.6e-10
67.8
98
36.7
AT4G01250
Arabidopsis thaliana
2.1e-10
67.4
99
35.4
AT1G66560
Arabidopsis thaliana
3.5e-10
66.6
58
51.7
AT2G40740
Arabidopsis thaliana
4.6e-10
66.2
69
47.8
AT4G23550
Arabidopsis thaliana
4.6e-10
66.2
83
39.8
AT4G01720
Arabidopsis thaliana
7.9e-10
65.5
86
43.0
Pp3c7_18860
Physcomitrella patens
7.9e-10
65.5
93
36.6
AT5G24110
Arabidopsis thaliana
1.0e-09
65.1
130
36.2
AT3G58710
Arabidopsis thaliana
5.1e-09
62.8
90
40.0
AT4G12020
Arabidopsis thaliana
6.7e-09
62.4
61
47.5
AT1G66600
Arabidopsis thaliana
8.7e-09
62.0
59
49.2
AT3G56400
Arabidopsis thaliana
8.7e-09
62.0
97
36.1
Pp3c5_12130
Physcomitrella patens
1.5e-08
61.2
56
50.0
AT1G80590
Arabidopsis thaliana
1.9e-08
60.8
62
46.8
Pp3c6_14470
Physcomitrella patens
2.5e-08
60.5
133
30.1
AT4G11070
Arabidopsis thaliana
5.7e-08
59.3
101
35.6
AT4G23810
Arabidopsis thaliana
7.4e-08
58.9
99
40.4
AT2G40750
Arabidopsis thaliana
1.6e-07
57.8
113
34.5
AT1G29280
Arabidopsis thaliana
4.1e-06
53.1
82
35.4
Pp3c14_11320
Physcomitrella patens
6.9e-06
52.4
55
40.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (72 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (36 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing