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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G41550
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G41550
Arabidopsis thaliana
0.0e+00
1954.9
1086
100.0
AT5G41750
Arabidopsis thaliana
0.0e+00
1209.9
1094
64.4
AT5G41740
Arabidopsis thaliana
0.0e+00
1114.0
995
66.3
AT5G40910
Arabidopsis thaliana
0.0e+00
1088.9
1088
56.0
AT5G41540
Arabidopsis thaliana
0.0e+00
1080.5
1001
64.3
AT5G58120
Arabidopsis thaliana
2.7e-238
827.0
1013
53.6
AT1G63730
Arabidopsis thaliana
1.5e-236
821.2
992
51.8
AT1G64070
Arabidopsis thaliana
3.3e-236
820.1
1006
47.3
AT1G63880
Arabidopsis thaliana
2.1e-235
817.4
1004
51.1
AT1G56540
Arabidopsis thaliana
2.2e-232
807.4
1022
50.9
AT1G63750
Arabidopsis thaliana
1.0e-229
798.5
1001
52.3
AT1G56510
Arabidopsis thaliana
5.5e-223
776.2
1009
47.2
AT2G16870
Arabidopsis thaliana
7.1e-223
775.8
1011
48.4
AT5G38850
Arabidopsis thaliana
3.4e-217
756.9
1008
46.0
AT1G56520
Arabidopsis thaliana
3.2e-215
750.4
1011
44.7
AT1G63870
Arabidopsis thaliana
7.9e-214
745.7
1012
43.7
AT1G63740
Arabidopsis thaliana
1.5e-212
741.5
964
49.9
AT4G14370
Arabidopsis thaliana
2.4e-210
734.2
963
50.2
AT4G11170
Arabidopsis thaliana
1.4e-207
724.9
913
50.8
AT5G49140
Arabidopsis thaliana
6.1e-206
719.5
995
47.3
AT1G65850
Arabidopsis thaliana
5.9e-201
703.0
1028
45.8
AT5G17970
Arabidopsis thaliana
3.9e-197
690.3
670
54.5
AT5G18370
Arabidopsis thaliana
4.1e-194
680.2
1013
46.2
AT2G14080
Arabidopsis thaliana
2.9e-192
674.1
1072
41.0
AT5G44510
Arabidopsis thaliana
1.5e-191
671.8
668
52.4
AT5G18360
Arabidopsis thaliana
1.4e-189
665.2
668
52.2
AT5G18350
Arabidopsis thaliana
2.4e-186
654.4
1180
38.4
AT3G44670
Arabidopsis thaliana
7.2e-183
642.9
1080
42.7
AT5G11250
Arabidopsis thaliana
2.1e-182
641.3
658
50.3
AT5G38340
Arabidopsis thaliana
2.3e-181
637.9
933
45.3
AT3G44480
Arabidopsis thaliana
4.0e-181
637.1
1008
44.9
AT1G63860
Arabidopsis thaliana
9.1e-178
625.9
887
45.0
AT3G25510
Arabidopsis thaliana
1.1e-175
619.0
650
50.0
AT5G22690
Arabidopsis thaliana
1.9e-175
618.2
902
45.5
AT5G46470
Arabidopsis thaliana
2.5e-175
617.8
671
48.1
AT5G51630
Arabidopsis thaliana
3.0e-173
610.9
670
49.9
AT5G46450
Arabidopsis thaliana
7.5e-172
606.3
673
47.0
AT1G69550
Arabidopsis thaliana
2.8e-171
604.4
660
48.0
AT3G04220
Arabidopsis thaliana
1.4e-170
602.1
664
48.3
AT4G08450
Arabidopsis thaliana
3.1e-170
600.9
1025
39.4
AT4G16950
Arabidopsis thaliana
3.8e-168
594.0
671
49.0
AT5G46260
Arabidopsis thaliana
2.8e-166
587.8
669
47.1
AT5G46270
Arabidopsis thaliana
1.0e-165
585.9
670
46.7
AT3G44400
Arabidopsis thaliana
2.0e-161
571.6
1001
40.8
AT4G16890
Arabidopsis thaliana
8.6e-160
566.2
667
47.4
AT5G46510
Arabidopsis thaliana
1.1e-159
565.8
664
46.8
AT1G31540
Arabidopsis thaliana
1.9e-159
565.1
672
46.9
AT4G16860
Arabidopsis thaliana
7.3e-159
563.1
681
47.6
AT5G46490
Arabidopsis thaliana
1.0e-157
559.3
734
43.2
AT3G44630
Arabidopsis thaliana
1.4e-157
558.9
670
46.4
AT4G16920
Arabidopsis thaliana
5.2e-157
557.0
673
47.7
AT5G46520
Arabidopsis thaliana
8.9e-157
556.2
673
46.1
AT4G16900
Arabidopsis thaliana
7.8e-153
543.1
665
45.6
AT4G16960
Arabidopsis thaliana
2.4e-146
521.5
660
46.2
AT4G16940
Arabidopsis thaliana
1.2e-140
502.7
619
46.2
AT5G17680
Arabidopsis thaliana
7.6e-140
500.0
656
42.5
AT5G38350
Arabidopsis thaliana
8.9e-133
476.5
754
38.1
AT1G72840
Arabidopsis thaliana
1.6e-126
455.7
674
40.7
AT5G40060
Arabidopsis thaliana
2.2e-123
445.3
828
38.4
AT1G66090
Arabidopsis thaliana
1.6e-121
439.1
390
58.5
AT3G04210
Arabidopsis thaliana
7.1e-114
413.7
404
51.0
AT1G17600
Arabidopsis thaliana
9.3e-114
413.3
672
37.8
AT5G48770
Arabidopsis thaliana
1.9e-106
389.0
679
38.0
AT5G40100
Arabidopsis thaliana
2.3e-104
382.1
673
36.6
AT4G19500
Arabidopsis thaliana
4.3e-103
377.9
450
45.3
AT1G72860
Arabidopsis thaliana
8.2e-102
373.6
705
35.2
AT4G12010
Arabidopsis thaliana
1.4e-101
372.9
693
34.6
AT4G16990
Arabidopsis thaliana
7.9e-97
357.1
439
43.3
AT5G36930
Arabidopsis thaliana
7.9e-97
357.1
660
35.9
AT4G09430
Arabidopsis thaliana
3.4e-92
341.7
681
34.1
AT4G36140
Arabidopsis thaliana
3.2e-90
335.1
1430
26.3
AT4G19520
Arabidopsis thaliana
1.0e-88
330.1
656
34.1
AT5G45060
Arabidopsis thaliana
3.8e-83
311.6
979
28.6
AT1G27170
Arabidopsis thaliana
1.4e-80
303.1
714
29.7
AT4G36150
Arabidopsis thaliana
1.5e-79
299.7
702
30.2
AT1G27180
Arabidopsis thaliana
1.3e-78
296.6
727
29.3
AT5G45250
Arabidopsis thaliana
3.7e-78
295.0
999
28.7
AT3G51570
Arabidopsis thaliana
6.5e-75
284.3
1008
27.5
AT5G17880
Arabidopsis thaliana
1.1e-74
283.5
1004
27.7
AT3G51560
Arabidopsis thaliana
1.9e-74
282.7
647
30.9
AT4G19530
Arabidopsis thaliana
2.5e-74
282.3
989
28.6
AT5G45230
Arabidopsis thaliana
1.4e-72
276.6
1131
27.1
AT4G12020
Arabidopsis thaliana
1.5e-71
273.1
673
29.4
AT5G45260
Arabidopsis thaliana
4.4e-71
271.6
662
29.2
AT5G45050
Arabidopsis thaliana
7.5e-71
270.8
916
27.6
AT4G19510
Arabidopsis thaliana
4.8e-70
268.1
671
29.7
AT5G45210
Arabidopsis thaliana
2.4e-69
265.8
647
30.0
AT5G44870
Arabidopsis thaliana
4.1e-69
265.0
744
26.9
AT5G45200
Arabidopsis thaliana
7.0e-69
264.2
689
28.6
AT1G57650
Arabidopsis thaliana
1.9e-66
256.1
676
29.7
AT5G17890
Arabidopsis thaliana
9.4e-66
253.8
660
29.7
AT2G17060
Arabidopsis thaliana
3.6e-65
251.9
710
26.9
AT1G72850
Arabidopsis thaliana
1.7e-62
243.0
438
35.4
AT1G72890
Arabidopsis thaliana
3.8e-59
231.9
421
33.7
AT1G72950
Arabidopsis thaliana
4.4e-55
218.4
373
33.8
AT1G72900
Arabidopsis thaliana
1.7e-54
216.5
364
37.1
AT2G17050
Arabidopsis thaliana
2.2e-54
216.1
517
31.3
AT1G17615
Arabidopsis thaliana
3.7e-54
215.3
372
34.1
AT4G09420
Arabidopsis thaliana
4.9e-54
214.9
448
32.4
AT1G72940
Arabidopsis thaliana
1.4e-53
213.4
365
35.1
AT5G48780
Arabidopsis thaliana
1.4e-53
213.4
416
33.9
AT1G72910
Arabidopsis thaliana
1.9e-50
203.0
345
34.2
AT5G38344
Arabidopsis thaliana
1.0e-48
197.2
160
58.8
Pp3c22_1030
Physcomitrella patens
4.0e-48
195.3
663
27.1
AT1G17610
Arabidopsis thaliana
8.9e-48
194.1
425
30.1
AT5G40090
Arabidopsis thaliana
4.4e-47
191.8
433
29.6
Pp3c10_15970
Physcomitrella patens
1.8e-45
186.4
695
26.3
AT1G72870
Arabidopsis thaliana
5.9e-44
181.4
490
29.6
Pp3c26_15380
Physcomitrella patens
3.6e-41
172.2
683
27.7
AT1G57630
Arabidopsis thaliana
1.7e-38
163.3
163
55.8
AT1G72920
Arabidopsis thaliana
6.4e-38
161.4
230
38.7
AT4G04110
Arabidopsis thaliana
6.4e-38
161.4
202
43.6
AT4G09360
Arabidopsis thaliana
1.4e-37
160.2
316
33.5
AT4G16930
Arabidopsis thaliana
2.5e-34
149.4
142
52.8
Pp3c10_21680
Physcomitrella patens
7.3e-34
147.9
688
24.0
Pp3c10_21693
Physcomitrella patens
7.3e-34
147.9
688
24.0
Pp3c1_17930
Physcomitrella patens
1.5e-26
123.6
349
30.1
AT5G45240
Arabidopsis thaliana
1.9e-26
123.2
432
23.1
Pp3c18_2880
Physcomitrella patens
4.3e-26
122.1
389
27.8
AT1G72930
Arabidopsis thaliana
7.3e-26
121.3
173
38.7
Pp3c2_12940
Physcomitrella patens
4.7e-25
118.6
420
24.5
Pp3c14_1111
Physcomitrella patens
6.2e-25
118.2
340
26.5
Pp3c13_15270
Physcomitrella patens
1.7e-22
110.2
416
22.8
Pp3c6_11870
Physcomitrella patens
3.8e-22
109.0
398
24.4
AT2G20142
Arabidopsis thaliana
1.1e-21
107.5
170
36.5
Pp3c16_23160
Physcomitrella patens
1.1e-21
107.5
367
25.3
Pp3c13_2910
Physcomitrella patens
5.4e-21
105.1
365
26.0
Pp3c13_2900
Physcomitrella patens
5.4e-21
105.1
365
26.0
AT1G47370
Arabidopsis thaliana
1.2e-20
104.0
299
27.1
Pp3c13_15200
Physcomitrella patens
1.6e-20
103.6
416
22.8
AT2G32140
Arabidopsis thaliana
2.1e-20
103.2
182
38.5
AT5G45070
Arabidopsis thaliana
2.7e-20
102.8
142
43.0
Pp3c22_5030
Physcomitrella patens
4.6e-20
102.1
545
23.7
Pp3c18_2410
Physcomitrella patens
4.6e-20
102.1
270
27.8
Pp3c13_3150
Physcomitrella patens
6.0e-20
101.7
348
24.7
Pp3c6_19080
Physcomitrella patens
7.8e-20
101.3
431
25.1
Pp3c18_4530
Physcomitrella patens
3.9e-19
99.0
376
24.5
Pp3c13_21810
Physcomitrella patens
5.1e-19
98.6
302
25.5
AT1G09665
Arabidopsis thaliana
8.7e-19
97.8
149
38.9
AT1G57670
Arabidopsis thaliana
8.7e-19
97.8
166
36.7
Pp3c13_21290
Physcomitrella patens
1.1e-18
97.4
338
24.0
AT4G19920
Arabidopsis thaliana
1.5e-18
97.1
193
29.5
AT1G57830
Arabidopsis thaliana
1.9e-18
96.7
137
39.4
Pp3c13_19900
Physcomitrella patens
3.3e-18
95.9
241
26.6
AT2G03030
Arabidopsis thaliana
7.3e-18
94.7
157
34.4
AT2G03300
Arabidopsis thaliana
7.3e-18
94.7
174
31.6
AT5G44900
Arabidopsis thaliana
9.6e-18
94.4
167
31.1
AT1G57850
Arabidopsis thaliana
1.6e-17
93.6
147
38.1
AT1G60320
Arabidopsis thaliana
1.6e-17
93.6
137
36.5
Pp3c2_780
Physcomitrella patens
1.4e-16
90.5
325
26.2
Pp3c2_730
Physcomitrella patens
1.4e-16
90.5
325
26.2
AT4G23515
Arabidopsis thaliana
1.8e-16
90.1
176
36.9
Pp3c6_8150
Physcomitrella patens
6.9e-16
88.2
365
21.9
Pp3c21_6260
Physcomitrella patens
1.2e-15
87.4
251
27.5
AT4G27190
Arabidopsis thaliana
1.5e-15
87.0
560
22.1
Pp3c6_5610
Physcomitrella patens
1.5e-15
87.0
278
24.1
Pp3c3_1460
Physcomitrella patens
3.4e-15
85.9
312
26.0
AT1G65390
Arabidopsis thaliana
4.4e-15
85.5
137
35.0
AT4G27220
Arabidopsis thaliana
4.4e-15
85.5
326
27.3
AT5G04720
Arabidopsis thaliana
5.8e-15
85.1
271
26.9
Pp3c22_2140
Physcomitrella patens
5.8e-15
85.1
351
25.9
Pp3c3_1260
Physcomitrella patens
5.8e-15
85.1
399
25.1
Pp3c14_6750
Physcomitrella patens
9.9e-15
84.3
323
23.2
Pp3c3_1280
Physcomitrella patens
9.9e-15
84.3
383
23.2
Pp3c16_20430
Physcomitrella patens
1.3e-14
84.0
314
25.5
Pp3c14_8120
Physcomitrella patens
1.3e-14
84.0
324
25.3
AT4G11340
Arabidopsis thaliana
1.4e-13
80.5
180
29.4
AT4G33300
Arabidopsis thaliana
1.9e-13
80.1
296
25.7
AT5G44920
Arabidopsis thaliana
3.2e-13
79.3
201
26.4
Pp3c3_1480
Physcomitrella patens
3.2e-13
79.3
399
24.3
AT1G58390
Arabidopsis thaliana
5.4e-13
78.6
292
23.3
AT4G23510
Arabidopsis thaliana
7.1e-13
78.2
192
32.3
AT3G46710
Arabidopsis thaliana
9.3e-13
77.8
267
23.6
AT5G47280
Arabidopsis thaliana
9.3e-13
77.8
246
26.0
Pp3c3_1350
Physcomitrella patens
9.3e-13
77.8
399
24.1
AT1G51270
Arabidopsis thaliana
1.2e-12
77.4
166
31.9
Pp3c7_4440
Physcomitrella patens
1.6e-12
77.0
237
28.3
AT1G33560
Arabidopsis thaliana
2.7e-12
76.3
171
31.0
AT5G45220
Arabidopsis thaliana
7.8e-12
74.7
217
30.4
Pp3c8_2150
Physcomitrella patens
1.0e-11
74.3
191
24.6
AT4G19925
Arabidopsis thaliana
1.3e-11
73.9
201
25.9
Pp3c15_2320
Physcomitrella patens
1.3e-11
73.9
179
29.6
AT5G45000
Arabidopsis thaliana
1.7e-11
73.6
174
28.7
Pp3c6_19100
Physcomitrella patens
2.3e-11
73.2
237
25.7
AT1G12210
Arabidopsis thaliana
8.7e-11
71.2
280
24.3
AT1G58410
Arabidopsis thaliana
1.9e-10
70.1
315
23.2
AT5G45080
Arabidopsis thaliana
2.5e-10
69.7
152
34.9
AT5G47250
Arabidopsis thaliana
2.5e-10
69.7
389
21.6
AT1G58602
Arabidopsis thaliana
4.3e-10
68.9
297
22.9
Pp3c17_9290
Physcomitrella patens
4.3e-10
68.9
505
20.6
AT4G26090
Arabidopsis thaliana
7.3e-10
68.2
285
23.5
Pp3c23_230
Physcomitrella patens
7.3e-10
68.2
425
19.8
AT1G50180
Arabidopsis thaliana
1.3e-09
67.4
278
23.4
AT3G46730
Arabidopsis thaliana
6.2e-09
65.1
280
21.4
Pp3c21_14710
Physcomitrella patens
1.1e-08
64.3
191
25.7
Pp3c7_21880
Physcomitrella patens
1.1e-08
64.3
192
26.6
AT3G46530
Arabidopsis thaliana
1.8e-08
63.5
279
22.6
AT1G58400
Arabidopsis thaliana
2.4e-08
63.2
285
22.5
AT1G58807
Arabidopsis thaliana
2.4e-08
63.2
298
21.5
AT1G59124
Arabidopsis thaliana
2.4e-08
63.2
298
21.5
Pp3c11_110
Physcomitrella patens
4.0e-08
62.4
497
21.5
AT1G58848
Arabidopsis thaliana
5.3e-08
62.0
286
21.3
AT1G59218
Arabidopsis thaliana
5.3e-08
62.0
286
21.3
Pp3c17_8750
Physcomitrella patens
1.2e-07
60.8
167
24.6
AT1G59620
Arabidopsis thaliana
1.5e-07
60.5
300
23.7
Pp3c14_5850
Physcomitrella patens
3.4e-07
59.3
470
19.4
Pp3c6_19077
Physcomitrella patens
1.3e-06
57.4
99
34.3
AT5G35450
Arabidopsis thaliana
2.9e-06
56.2
302
22.8
ccr13680
Chondrus crispus
3.8e-06
55.8
166
30.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (159 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (49 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing