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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G38830
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G38830
Arabidopsis thaliana
1.7e-275
949.5
512
100.0
AT3G56300
Arabidopsis thaliana
1.6e-169
597.4
504
69.4
Pp3c24_17740
Physcomitrella patens
1.1e-149
531.6
508
51.8
AT2G31170
Arabidopsis thaliana
1.1e-144
515.0
498
52.6
Cre01.g069472
Chlamydomonas reinhardtii
7.8e-103
375.9
606
44.1
ccr69820
Chondrus crispus
4.9e-73
276.9
505
34.3
sya00G40270
Synedra acus
4.9e-73
276.9
490
37.3
Naga_100013g2
Nannochloropsis gaditana
8.4e-73
276.2
379
39.8
gsu118400
Galdieria sulphuraria
2.4e-72
274.6
384
38.5
PSNMU-V1.4_AUG-EV-PASAV3_0016440
Pseudo-nitzschia multistriata
3.9e-70
267.3
388
39.7
Sro91_g047640
Seminavis robusta
5.1e-70
266.9
503
33.0
ps00G71330
Pseudo-nitzschia multiseries
1.9e-69
265.0
344
42.4
gene13676
Fragilariopsis cylindrus
6.2e-68
260.0
384
39.3
sya00G37710
Synedra acus
2.4e-67
258.1
506
32.8
Ec-10_004180
Ectocarpus siliculosus
4.0e-67
257.3
520
32.1
CC00G143340
Cyclotella cryptica
6.9e-67
256.5
401
38.4
CC00G189060
Cyclotella cryptica
6.9e-67
256.5
401
38.4
AA0007G02280
Aureococcus anophagefferens
4.4e-66
253.8
407
37.3
sya00G01830
Synedra acus
1.7e-65
251.9
402
38.8
tho247180
Thalassiosira oceanica
2.2e-65
251.5
400
37.5
tps107090
Thalassiosira pseudonana
2.9e-65
251.1
388
38.9
ccr176840
Chondrus crispus
3.2e-64
247.7
332
41.9
ENSG00000134905
Homo sapiens
4.2e-64
247.3
330
42.7
emh92980
Emiliania huxleyi
1.3e-62
242.3
332
38.9
Ec-12_001440
Ectocarpus siliculosus
3.0e-62
241.1
341
41.6
pte300580
Paramecium tetraurelia
6.6e-62
240.0
322
40.7
CM05G00370
Cyanidioschyzon merolae
1.1e-61
239.2
504
32.5
gsu122140
Galdieria sulphuraria
2.5e-61
238.0
400
35.8
ptri244100
Phaeodactylum tricornutum
7.3e-61
236.5
510
31.8
ENSG00000110619
Homo sapiens
4.8e-60
233.8
487
32.9
ENSG00000278191
Homo sapiens
4.8e-60
233.8
487
32.9
pte59360
Paramecium tetraurelia
8.1e-60
233.0
322
40.4
Ec-02_002270
Ectocarpus siliculosus
4.0e-59
230.7
402
34.6
ptri182910
Phaeodactylum tricornutum
6.9e-59
229.9
388
36.3
gsu137350
Galdieria sulphuraria
1.5e-58
228.8
367
35.7
Naga_100030g38
Nannochloropsis gaditana
2.9e-57
224.6
309
42.7
FBgn0027091
Drosophila melanogaster
3.8e-57
224.2
431
33.2
FBgn0033900
Drosophila melanogaster
4.9e-57
223.8
381
36.7
pte115710
Paramecium tetraurelia
6.4e-57
223.4
332
38.3
AA0004G03330
Aureococcus anophagefferens
3.2e-56
221.1
267
44.6
fso162670
Fistulifera solaris
9.3e-56
219.5
357
38.7
WBGene00000800
Caenorhabditis elegans
1.3e-54
215.7
500
31.4
fso164820
Fistulifera solaris
3.9e-54
214.2
513
31.2
fso139070
Fistulifera solaris
6.7e-54
213.4
512
31.8
emh300850
Emiliania huxleyi
1.5e-53
212.2
403
32.3
PSNMU-V1.4_AUG-EV-PASAV3_0047050
Pseudo-nitzschia multistriata
4.3e-53
210.7
516
28.9
fso93550
Fistulifera solaris
2.4e-51
204.9
527
29.6
CM08G00900
Cyanidioschyzon merolae
3.1e-51
204.5
351
36.8
YNL247W
Saccharomyces cerevisiae strain S288C
5.3e-51
203.8
516
31.0
SPAC29E6.06c
Schizosaccharomyces pombe
6.9e-51
203.4
504
29.8
fso158830
Fistulifera solaris
2.0e-50
201.8
527
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0122670
Pseudo-nitzschia multistriata
4.5e-50
200.7
333
40.2
tps58650
Thalassiosira pseudonana
4.5e-50
200.7
528
29.9
ccr78540
Chondrus crispus
1.3e-49
199.1
319
36.7
sya00G25560
Synedra acus
1.3e-49
199.1
366
35.0
fso117590
Fistulifera solaris
4.2e-48
194.1
311
39.5
gene18203
Fragilariopsis cylindrus
7.1e-48
193.4
404
33.4
CC00G129530
Cyclotella cryptica
2.1e-47
191.8
505
29.3
Sro27_g018040
Seminavis robusta
2.7e-47
191.4
520
28.3
Pp3c9_7700
Physcomitrella patens
3.5e-47
191.0
439
30.8
Cre03.g169850
Chlamydomonas reinhardtii
6.0e-47
190.3
538
29.4
gsu04030
Galdieria sulphuraria
1.8e-46
188.7
355
33.8
Sro1515_g279050
Seminavis robusta
3.9e-46
187.6
323
35.6
tps42440
Thalassiosira pseudonana
1.1e-45
186.0
320
36.6
gene6444
Fragilariopsis cylindrus
6.2e-44
180.3
299
38.8
ps00G69190
Pseudo-nitzschia multiseries
4.1e-43
177.6
445
30.1
ps00G20820
Pseudo-nitzschia multiseries
4.5e-42
174.1
501
27.5
emh465540
Emiliania huxleyi
1.7e-41
172.2
471
28.0
ptri95460
Phaeodactylum tricornutum
1.1e-40
169.5
439
30.8
tho145040
Thalassiosira oceanica
1.1e-40
169.5
380
32.6
CC00G141030
Cyclotella cryptica
4.2e-40
167.5
446
30.0
CM11G02090
Cyanidioschyzon merolae
7.9e-39
163.3
287
35.9
Pp3c15_4020
Physcomitrella patens
3.1e-35
151.4
225
37.8
CC00G32130
Cyclotella cryptica
5.0e-33
144.1
214
39.7
ccr42720
Chondrus crispus
4.7e-23
110.9
163
40.5
ccr141420
Chondrus crispus
1.8e-22
109.0
142
42.3
tho122960
Thalassiosira oceanica
1.2e-07
59.7
61
45.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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