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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G27470
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G27470
Arabidopsis thaliana
3.2e-262
905.2
452
100.0
Pp3c13_16820
Physcomitrella patens
3.8e-178
625.9
435
70.1
gsu78080
Galdieria sulphuraria
9.1e-148
525.0
450
56.0
CM14G01780
Cyanidioschyzon merolae
3.6e-144
513.1
466
54.7
Cre03.g189400
Chlamydomonas reinhardtii
4.4e-142
506.1
452
56.0
ccr102880
Chondrus crispus
3.5e-139
496.5
468
54.5
Pp3c4_17270
Physcomitrella patens
3.8e-138
493.0
328
71.3
SPAC29A4.15
Schizosaccharomyces pombe
1.4e-135
484.6
461
54.2
pte600420
Paramecium tetraurelia
6.6e-130
465.7
448
53.3
pte666080
Paramecium tetraurelia
2.5e-129
463.8
448
52.9
YDR023W
Saccharomyces cerevisiae strain S288C
5.6e-129
462.6
462
53.0
Ec-24_004300
Ectocarpus siliculosus
8.9e-127
455.3
436
53.9
WBGene00005663
Caenorhabditis elegans
1.7e-125
451.1
487
49.5
emh621460
Emiliania huxleyi
1.7e-125
451.1
436
51.1
AA0005G00370
Aureococcus anophagefferens
2.0e-123
444.1
439
52.8
sya00G112740
Synedra acus
7.3e-121
435.6
461
50.3
ptri24290
Phaeodactylum tricornutum
4.0e-119
429.9
476
49.2
ENSG00000031698
Homo sapiens
1.5e-118
427.9
510
46.5
CC00G98430
Cyclotella cryptica
1.1e-116
421.8
489
47.2
gene16716
Fragilariopsis cylindrus
2.7e-115
417.2
464
48.1
gene4210
Fragilariopsis cylindrus
2.7e-115
417.2
464
48.1
FBgn0031497
Drosophila melanogaster
3.5e-115
416.8
499
46.1
PSNMU-V1.4_AUG-EV-PASAV3_0044860
Pseudo-nitzschia multistriata
6.0e-115
416.0
476
47.7
fso68300
Fistulifera solaris
1.9e-113
411.0
476
47.1
ps00G189790
Pseudo-nitzschia multiseries
4.3e-113
409.8
461
47.9
fso22240
Fistulifera solaris
2.1e-112
407.5
476
46.6
Naga_100067g2
Nannochloropsis gaditana
5.2e-111
402.9
390
52.3
tps202370
Thalassiosira pseudonana
1.9e-108
394.4
487
45.6
Sro251_g099270
Seminavis robusta
2.7e-107
390.6
475
45.5
Sro31_g020380
Seminavis robusta
6.0e-107
389.4
475
45.9
tho477320
Thalassiosira oceanica
1.0e-74
282.3
341
46.0
Naga_100021g9
Nannochloropsis gaditana
1.1e-63
245.7
454
35.7
CM11G00960
Cyanidioschyzon merolae
1.7e-61
238.4
423
35.9
ccr109780
Chondrus crispus
1.4e-60
235.3
428
33.2
AT1G11870
Arabidopsis thaliana
1.2e-59
232.3
438
32.6
ps00G157630
Pseudo-nitzschia multiseries
1.1e-57
225.7
425
34.6
fso43080
Fistulifera solaris
1.5e-57
225.3
400
36.0
Pp3c5_28560
Physcomitrella patens
2.0e-57
224.9
460
33.3
gsu16210
Galdieria sulphuraria
1.3e-56
222.2
418
34.2
ptri51790
Phaeodactylum tricornutum
9.1e-55
216.1
360
34.7
tho11040
Thalassiosira oceanica
1.2e-54
215.7
446
32.1
fso113070
Fistulifera solaris
4.5e-54
213.8
348
36.8
tps99210
Thalassiosira pseudonana
7.7e-54
213.0
339
34.2
Cre02.g082877
Chlamydomonas reinhardtii
2.2e-53
211.5
448
30.4
ps00G17670
Pseudo-nitzschia multiseries
5.0e-53
210.3
366
35.0
gene11536
Fragilariopsis cylindrus
6.5e-53
209.9
373
35.4
CC00G125230
Cyclotella cryptica
4.2e-52
207.2
404
31.9
sya00G98510
Synedra acus
4.2e-52
207.2
405
33.8
Sro530_g161270
Seminavis robusta
5.5e-52
206.8
450
31.1
PSNMU-V1.4_AUG-EV-PASAV3_0007150
Pseudo-nitzschia multistriata
8.8e-50
199.5
455
32.5
Ec-08_002360
Ectocarpus siliculosus
7.4e-49
196.4
433
32.1
AA0009G01340
Aureococcus anophagefferens
1.4e-47
192.2
435
32.0
FBgn0021750
Drosophila melanogaster
1.3e-45
185.7
335
33.4
emh279960
Emiliania huxleyi
1.9e-44
181.8
449
29.0
YHR011W
Saccharomyces cerevisiae strain S288C
4.2e-44
180.6
424
29.5
ENSG00000104835
Homo sapiens
9.4e-44
179.5
412
30.8
SPAC25B8.06c
Schizosaccharomyces pombe
3.0e-42
174.5
413
30.5
WBGene00005662
Caenorhabditis elegans
1.1e-31
139.4
419
26.0
sya00G214640
Synedra acus
1.8e-23
112.1
286
28.3
Pp3c3_17030
Physcomitrella patens
4.1e-23
110.9
68
67.6
Cre02.g082825
Chlamydomonas reinhardtii
1.2e-22
109.4
183
34.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing