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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G22110
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G22110
Arabidopsis thaliana
5.4e-309
1060.8
527
100.0
Pp3c16_3220
Physcomitrella patens
1.3e-164
581.3
525
53.3
Ec-11_000450
Ectocarpus siliculosus
7.2e-96
352.8
520
37.5
CC00G142800
Cyclotella cryptica
3.0e-86
320.9
552
34.2
tps06590
Thalassiosira pseudonana
4.1e-83
310.5
518
34.9
Cre10.g424200
Chlamydomonas reinhardtii
2.7e-82
307.8
570
34.6
ccr176220
Chondrus crispus
8.0e-79
296.2
480
34.8
ENSG00000100479
Homo sapiens
5.8e-77
290.0
535
33.8
tho85680
Thalassiosira oceanica
2.7e-74
281.2
397
36.8
sya00G162390
Synedra acus
3.5e-74
280.8
523
32.9
SPBP8B7.14c
Schizosaccharomyces pombe
1.9e-64
248.4
477
30.0
FBgn0035644
Drosophila melanogaster
8.1e-55
216.5
533
30.2
fso59710
Fistulifera solaris
3.9e-49
197.6
529
29.9
WBGene00017237
Caenorhabditis elegans
8.7e-49
196.4
542
28.6
ptri10260
Phaeodactylum tricornutum
4.3e-48
194.1
462
31.4
Sro1993_g309900
Seminavis robusta
4.8e-47
190.7
535
29.7
fso193450
Fistulifera solaris
6.2e-47
190.3
488
31.8
YPR175W
Saccharomyces cerevisiae strain S288C
2.3e-41
171.8
512
28.3
gsu32630
Galdieria sulphuraria
4.0e-38
161.0
505
25.5
AA0053G00290
Aureococcus anophagefferens
1.4e-27
125.9
317
31.5
ps00G165630
Pseudo-nitzschia multiseries
2.2e-12
75.5
315
25.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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