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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G18650
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G18650
Arabidopsis thaliana
3.4e-142
505.8
268
100.0
AT3G62970
Arabidopsis thaliana
7.5e-81
302.0
262
61.8
Pp3c1_6070
Physcomitrella patens
2.2e-77
290.4
265
61.5
Pp3c2_31820
Physcomitrella patens
8.5e-77
288.5
267
60.7
Pp3c11_6970
Physcomitrella patens
1.9e-76
287.3
258
59.7
AT5G22920
Arabidopsis thaliana
2.0e-73
277.3
251
58.2
Pp3c10_4820
Physcomitrella patens
1.6e-70
267.7
257
58.0
Pp3c14_5600
Physcomitrella patens
2.5e-68
260.4
248
58.5
Cre17.g718300
Chlamydomonas reinhardtii
5.9e-62
239.2
261
52.9
AT5G25560
Arabidopsis thaliana
3.2e-55
216.9
227
54.2
FBgn0031816
Drosophila melanogaster
2.3e-45
184.1
243
35.0
ENSG00000163743
Homo sapiens
1.2e-43
178.3
231
37.2
Cre05.g248550
Chlamydomonas reinhardtii
2.0e-41
171.0
246
39.4
ccr161060
Chondrus crispus
4.4e-41
169.9
254
34.6
gsu76240
Galdieria sulphuraria
5.8e-41
169.5
264
38.6
AT1G18910
Arabidopsis thaliana
1.4e-39
164.9
249
36.9
ccr65580
Chondrus crispus
1.9e-39
164.5
262
31.7
Pp3c6_1960
Physcomitrella patens
3.2e-39
163.7
248
43.1
Ec-26_004520
Ectocarpus siliculosus
5.4e-39
162.9
263
36.9
Pp3c25_14501
Physcomitrella patens
1.6e-38
161.4
248
44.4
Pp3c25_14500
Physcomitrella patens
1.6e-38
161.4
248
44.4
AT1G74770
Arabidopsis thaliana
2.1e-38
161.0
248
33.1
CM13G01410
Cyanidioschyzon merolae
2.1e-38
161.0
247
38.5
AT3G18290
Arabidopsis thaliana
1.0e-37
158.7
258
32.2
SPAC2F3.16
Schizosaccharomyces pombe
1.0e-37
158.7
243
36.2
CC00G86210
Cyclotella cryptica
5.1e-37
156.4
249
31.7
ps00G05920
Pseudo-nitzschia multiseries
3.3e-36
153.7
266
39.5
Naga_100090g9
Nannochloropsis gaditana
4.3e-36
153.3
252
33.3
fso155640
Fistulifera solaris
1.1e-34
148.7
248
32.3
ccr36960
Chondrus crispus
2.3e-34
147.5
260
35.4
sya00G162130
Synedra acus
6.8e-34
146.0
253
31.2
gene16313
Fragilariopsis cylindrus
3.4e-33
143.7
244
29.9
ps00G33510
Pseudo-nitzschia multiseries
3.4e-33
143.7
244
29.5
ptri130290
Phaeodactylum tricornutum
1.3e-32
141.7
244
30.3
Sro968_g226070
Seminavis robusta
3.8e-32
140.2
244
28.7
Sro99_g050950
Seminavis robusta
4.9e-32
139.8
244
29.5
sya00G161050
Synedra acus
2.4e-31
137.5
244
29.5
tps146910
Thalassiosira pseudonana
2.1e-30
134.4
208
30.8
fso77050
Fistulifera solaris
3.5e-30
133.7
246
32.9
fso191720
Fistulifera solaris
3.5e-30
133.7
246
32.9
tps130000
Thalassiosira pseudonana
1.0e-29
132.1
247
30.0
fso77080
Fistulifera solaris
1.7e-29
131.3
244
28.7
tho87860
Thalassiosira oceanica
2.3e-29
131.0
221
38.9
pte243060
Paramecium tetraurelia
5.1e-29
129.8
248
37.5
sya00G196410
Synedra acus
7.3e-28
125.9
272
32.0
tps142420
Thalassiosira pseudonana
7.3e-28
125.9
245
33.1
fso160310
Fistulifera solaris
9.6e-28
125.6
244
29.1
pte760660
Paramecium tetraurelia
2.1e-27
124.4
247
42.1
tho217020
Thalassiosira oceanica
2.8e-27
124.0
251
31.5
ptri72160
Phaeodactylum tricornutum
3.1e-26
120.6
270
30.7
gene11141
Fragilariopsis cylindrus
8.9e-26
119.0
193
43.0
ps00G65070
Pseudo-nitzschia multiseries
1.5e-25
118.2
279
31.9
pte443830
Paramecium tetraurelia
5.8e-25
116.3
243
40.3
gene18213
Fragilariopsis cylindrus
7.6e-25
115.9
275
31.6
CC00G149660
Cyclotella cryptica
6.4e-24
112.8
299
29.4
Sro695_g188680
Seminavis robusta
1.5e-20
101.7
248
31.0
fso150310
Fistulifera solaris
1.9e-20
101.3
192
30.2
CC00G69060
Cyclotella cryptica
2.1e-11
71.2
147
26.5
ccr83600
Chondrus crispus
4.9e-08
60.1
86
31.4
Sro345_g122370
Seminavis robusta
2.1e-06
54.7
99
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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