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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G33090
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G33090
Arabidopsis thaliana
0.0e+00
1760.3
880
100.0
Pp3c19_6990
Physcomitrella patens
3.8e-299
1028.9
881
57.1
FBgn0261243
Drosophila melanogaster
3.9e-203
709.9
874
44.3
ENSG00000141279
Homo sapiens
7.6e-199
695.7
873
44.9
CM19G03410
Cyanidioschyzon merolae
6.2e-185
649.4
863
42.4
gsu83120
Galdieria sulphuraria
2.0e-183
644.4
883
41.8
gsu105990
Galdieria sulphuraria
3.2e-173
610.5
877
39.8
CC00G134150
Cyclotella cryptica
3.9e-171
603.6
887
39.5
Naga_100070g24
Nannochloropsis gaditana
5.1e-171
603.2
886
39.7
ptri60100
Phaeodactylum tricornutum
6.5e-166
586.3
886
38.8
fso03360
Fistulifera solaris
2.3e-163
577.8
884
38.1
fso201650
Fistulifera solaris
1.1e-162
575.5
884
38.1
PSNMU-V1.4_AUG-EV-PASAV3_0067690
Pseudo-nitzschia multistriata
4.4e-162
573.5
906
38.2
tps41500
Thalassiosira pseudonana
8.2e-161
569.3
788
40.7
gene11630
Fragilariopsis cylindrus
3.5e-159
563.9
887
38.8
Ec-27_001510
Ectocarpus siliculosus
2.2e-158
561.2
888
38.0
WBGene00003914
Caenorhabditis elegans
1.1e-157
558.9
877
37.6
AA0011G01290
Aureococcus anophagefferens
2.2e-150
534.6
904
38.6
SPBC1921.05
Schizosaccharomyces pombe
5.5e-149
530.0
886
37.7
Ec-26_003100
Ectocarpus siliculosus
9.4e-149
529.3
907
36.4
YKL157W
Saccharomyces cerevisiae strain S288C
2.5e-141
504.6
871
35.9
YHR047C
Saccharomyces cerevisiae strain S288C
1.2e-140
502.3
867
35.6
fso178070
Fistulifera solaris
3.4e-138
494.2
873
36.2
ENSG00000138792
Homo sapiens
4.4e-138
493.8
875
35.4
fso19810
Fistulifera solaris
1.3e-137
492.3
873
36.1
sya00G28140
Synedra acus
6.3e-137
490.0
918
35.6
FBgn0052473
Drosophila melanogaster
4.1e-128
460.7
892
33.5
Sro1219_g253390
Seminavis robusta
3.9e-126
454.1
901
35.8
Sro1204_g252220
Seminavis robusta
2.5e-125
451.4
888
33.4
FBgn0038136
Drosophila melanogaster
1.8e-123
445.3
904
34.1
sya00G264910
Synedra acus
5.2e-123
443.7
726
35.5
FBgn0038135
Drosophila melanogaster
3.4e-122
441.0
880
33.4
ENSG00000164308
Homo sapiens
1.4e-120
435.6
910
31.4
ENSG00000164307
Homo sapiens
5.4e-120
433.7
900
30.9
FBgn0039640
Drosophila melanogaster
1.1e-115
419.5
907
32.1
ENSG00000166825
Homo sapiens
7.1e-112
406.8
900
31.3
ENSG00000113441
Homo sapiens
1.2e-111
406.0
877
31.7
FBgn0263236
Drosophila melanogaster
1.6e-103
379.0
908
30.3
ENSG00000072657
Homo sapiens
7.8e-103
376.7
893
29.6
FBgn0051445
Drosophila melanogaster
2.3e-102
375.2
914
30.7
sya00G86000
Synedra acus
1.1e-96
356.3
611
34.7
sya00G194710
Synedra acus
2.4e-96
355.1
611
34.7
WBGene00011587
Caenorhabditis elegans
1.0e-94
349.7
951
29.8
WBGene00009865
Caenorhabditis elegans
1.3e-94
349.4
886
28.0
FBgn0051198
Drosophila melanogaster
6.4e-89
330.5
890
27.3
FBgn0051233
Drosophila melanogaster
2.7e-87
325.1
900
29.8
FBgn0051343
Drosophila melanogaster
1.1e-85
319.7
930
28.1
FBgn0015541
Drosophila melanogaster
2.1e-84
315.5
890
27.9
FBgn0039656
Drosophila melanogaster
4.5e-82
307.8
427
40.0
ENSG00000172901
Homo sapiens
4.5e-82
307.8
911
27.4
FBgn0046253
Drosophila melanogaster
5.8e-74
280.8
637
31.4
FBgn0038897
Drosophila melanogaster
9.0e-67
256.9
598
30.6
WBGene00012776
Caenorhabditis elegans
8.5e-65
250.4
554
29.6
WBGene00011000
Caenorhabditis elegans
3.9e-62
241.5
592
28.5
WBGene00010999
Caenorhabditis elegans
2.5e-61
238.8
662
29.3
FBgn0030223
Drosophila melanogaster
4.1e-59
231.5
903
25.8
WBGene00011803
Caenorhabditis elegans
2.2e-57
225.7
554
30.1
Cre02.g076200
Chlamydomonas reinhardtii
3.2e-56
221.9
426
35.2
WBGene00022073
Caenorhabditis elegans
2.9e-49
198.7
390
32.8
pte613340
Paramecium tetraurelia
2.7e-47
192.2
365
30.7
FBgn0039064
Drosophila melanogaster
1.5e-45
186.4
993
22.7
FBgn0030222
Drosophila melanogaster
1.5e-45
186.4
892
23.9
pte531980
Paramecium tetraurelia
4.1e-43
178.3
362
29.3
YIL137C
Saccharomyces cerevisiae strain S288C
5.5e-40
167.9
489
28.2
Ec-14_003210
Ectocarpus siliculosus
1.8e-38
162.9
264
33.0
FBgn0028935
Drosophila melanogaster
4.0e-38
161.8
491
27.3
pte66070
Paramecium tetraurelia
4.4e-37
158.3
382
27.5
pte400570
Paramecium tetraurelia
1.6e-34
149.8
362
28.7
pte610300
Paramecium tetraurelia
1.6e-34
149.8
362
28.5
WBGene00007071
Caenorhabditis elegans
5.9e-34
147.9
737
22.8
FBgn0058470
Drosophila melanogaster
1.2e-31
140.2
894
21.5
ccr89560
Chondrus crispus
2.6e-29
132.5
351
29.6
FBgn0036186
Drosophila melanogaster
9.8e-29
130.6
636
24.4
WBGene00020465
Caenorhabditis elegans
1.7e-28
129.8
487
24.6
Sro1796_g298110
Seminavis robusta
1.0e-25
120.6
339
26.0
Cre09.g402256
Chlamydomonas reinhardtii
8.5e-25
117.5
232
31.9
emh682570
Emiliania huxleyi
8.5e-25
117.5
341
29.6
fso85390
Fistulifera solaris
8.5e-25
117.5
389
27.2
WBGene00016589
Caenorhabditis elegans
1.5e-24
116.7
434
27.6
Naga_100111g8
Nannochloropsis gaditana
9.5e-24
114.0
394
24.9
fso137450
Fistulifera solaris
2.8e-23
112.5
389
25.7
FBgn0032721
Drosophila melanogaster
4.7e-23
111.7
349
28.7
gsu64620
Galdieria sulphuraria
6.1e-23
111.3
406
26.8
Naga_100009g11
Nannochloropsis gaditana
1.4e-22
110.2
325
29.8
fso02570
Fistulifera solaris
1.8e-22
109.8
420
23.8
fso63450
Fistulifera solaris
1.8e-22
109.8
416
23.6
Sro210_g087630
Seminavis robusta
1.8e-22
109.8
320
25.9
tps112910
Thalassiosira pseudonana
1.8e-22
109.8
390
25.9
ENSG00000111144
Homo sapiens
4.0e-22
108.6
469
24.3
CC00G91960
Cyclotella cryptica
5.2e-22
108.2
398
26.1
CC00G196350
Cyclotella cryptica
5.2e-22
108.2
398
26.1
AA0001G00710
Aureococcus anophagefferens
6.8e-22
107.8
398
25.9
AA0001G04820
Aureococcus anophagefferens
6.8e-22
107.8
342
29.2
Sro552_g165030
Seminavis robusta
6.8e-22
107.8
358
27.7
CC00G27230
Cyclotella cryptica
8.8e-22
107.5
379
26.1
sya00G168100
Synedra acus
8.8e-22
107.5
306
29.1
pte253710
Paramecium tetraurelia
2.6e-21
105.9
466
23.6
tps220390
Thalassiosira pseudonana
3.4e-21
105.5
382
28.3
pte688010
Paramecium tetraurelia
5.7e-21
104.8
349
25.8
ptri105260
Phaeodactylum tricornutum
7.5e-21
104.4
313
24.6
PSNMU-V1.4_AUG-EV-PASAV3_0066830
Pseudo-nitzschia multistriata
1.3e-20
103.6
350
27.1
WBGene00022610
Caenorhabditis elegans
1.7e-20
103.2
400
24.8
gene10467
Fragilariopsis cylindrus
1.7e-20
103.2
389
24.9
ptri69210
Phaeodactylum tricornutum
1.7e-20
103.2
413
26.6
Ec-09_003180
Ectocarpus siliculosus
2.2e-20
102.8
371
29.4
ps00G120460
Pseudo-nitzschia multiseries
2.2e-20
102.8
319
27.3
ps00G156850
Pseudo-nitzschia multiseries
2.2e-20
102.8
388
25.8
Ec-05_005680
Ectocarpus siliculosus
6.3e-20
101.3
360
24.4
gene8713
Fragilariopsis cylindrus
6.3e-20
101.3
355
24.8
Cre13.g585900
Chlamydomonas reinhardtii
1.1e-19
100.5
330
27.6
sya00G60110
Synedra acus
2.4e-19
99.4
443
22.1
ccr94520
Chondrus crispus
1.2e-18
97.1
369
26.8
sya00G159780
Synedra acus
1.6e-18
96.7
309
28.8
Pp3c26_1330
Physcomitrella patens
2.7e-18
95.9
402
24.4
sya00G34490
Synedra acus
2.7e-18
95.9
369
26.6
Cre17.g736650
Chlamydomonas reinhardtii
3.5e-18
95.5
400
25.5
PSNMU-V1.4_AUG-EV-PASAV3_0037070
Pseudo-nitzschia multistriata
3.5e-18
95.5
367
24.8
Pp3c15_1150
Physcomitrella patens
3.5e-18
95.5
333
27.6
sya00G132560
Synedra acus
3.5e-18
95.5
365
26.6
gsu106630
Galdieria sulphuraria
4.5e-18
95.1
321
27.1
emh678950
Emiliania huxleyi
7.8e-18
94.4
386
24.9
ENSG00000176393
Homo sapiens
7.8e-18
94.4
311
26.7
SPCC1322.05c
Schizosaccharomyces pombe
7.8e-18
94.4
307
27.7
AT5G13520
Arabidopsis thaliana
2.3e-17
92.8
361
25.8
CM06G01820
Cyanidioschyzon merolae
3.8e-17
92.0
369
24.9
pte576620
Paramecium tetraurelia
6.6e-17
91.3
418
21.5
Pp3c9_1240
Physcomitrella patens
2.5e-16
89.4
335
26.9
YNL045W
Saccharomyces cerevisiae strain S288C
5.6e-16
88.2
314
24.2
emh765610
Emiliania huxleyi
7.3e-16
87.8
391
24.3
tho101840
Thalassiosira oceanica
1.2e-15
87.0
460
25.9
pte143120
Paramecium tetraurelia
1.6e-15
86.7
415
23.4
tps27130
Thalassiosira pseudonana
1.6e-15
86.7
300
25.7
pte335500
Paramecium tetraurelia
6.1e-15
84.7
382
21.7
AT1G63770
Arabidopsis thaliana
1.0e-14
84.0
465
22.6
gsu115180
Galdieria sulphuraria
1.5e-13
80.1
338
24.0
pte61780
Paramecium tetraurelia
4.4e-13
78.6
327
26.0
pte145250
Paramecium tetraurelia
1.7e-12
76.6
351
23.4
ccr130960
Chondrus crispus
2.2e-12
76.3
312
23.1
CC00G44110
Cyclotella cryptica
1.4e-11
73.6
295
23.1
pte647060
Paramecium tetraurelia
1.2e-10
70.5
492
21.5
Sro1947_g307120
Seminavis robusta
2.7e-10
69.3
490
21.0
pte351050
Paramecium tetraurelia
3.5e-10
68.9
324
24.4
pte395280
Paramecium tetraurelia
7.8e-10
67.8
320
23.8
pte118570
Paramecium tetraurelia
1.0e-09
67.4
299
23.1
FBgn0011836
Drosophila melanogaster
1.7e-09
66.6
387
22.0
tho115400
Thalassiosira oceanica
1.7e-09
66.6
141
32.6
emh26070
Emiliania huxleyi
4.3e-08
62.0
313
26.8
ENSG00000142327
Homo sapiens
9.5e-08
60.8
187
27.8
tho356920
Thalassiosira oceanica
4.0e-06
55.5
252
26.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (11 genes)
Drosophila melanogaster (22 genes)
Caenorhabditis elegans (12 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (16 genes)
Seminavis robusta (6 genes)
Synedra acus (9 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing