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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G33050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G33050
Arabidopsis thaliana
3.2e-293
1008.4
527
100.0
AT2G26190
Arabidopsis thaliana
4.3e-197
689.1
517
70.8
AT5G57010
Arabidopsis thaliana
3.6e-127
456.8
466
53.9
AT3G13600
Arabidopsis thaliana
8.0e-103
375.9
595
41.0
AT3G58480
Arabidopsis thaliana
1.4e-99
365.2
590
40.7
AT3G52870
Arabidopsis thaliana
9.8e-85
315.8
432
41.9
Pp3c12_8320
Physcomitrella patens
2.5e-64
248.1
333
41.1
Naga_100004g176
Nannochloropsis gaditana
2.5e-16
88.6
171
31.6
Sro2485_g329010
Seminavis robusta
1.0e-12
76.6
215
31.6
Sro1559_g282460
Seminavis robusta
1.0e-12
76.6
215
31.6
CC00G155800
Cyclotella cryptica
9.4e-11
70.1
203
31.5
fso117430
Fistulifera solaris
2.3e-09
65.5
227
30.4
fso162840
Fistulifera solaris
1.1e-08
63.2
230
28.3
Cre16.g686600
Chlamydomonas reinhardtii
2.6e-08
62.0
158
33.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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