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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G20210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G20210
Arabidopsis thaliana
0.0e+00
1201.4
601
100.0
AT4G20200
Arabidopsis thaliana
1.1e-204
714.5
605
60.8
AT1G66020
Arabidopsis thaliana
1.6e-200
700.7
596
60.1
AT4G20230
Arabidopsis thaliana
1.2e-198
694.5
600
58.0
AT3G29190
Arabidopsis thaliana
4.3e-193
676.0
605
57.4
AT3G29110
Arabidopsis thaliana
3.6e-184
646.4
576
56.1
AT1G48800
Arabidopsis thaliana
8.9e-175
615.1
602
52.8
AT4G15870
Arabidopsis thaliana
2.9e-157
557.0
598
49.8
AT1G48820
Arabidopsis thaliana
8.1e-152
538.9
601
49.3
AT5G44630
Arabidopsis thaliana
7.1e-148
525.8
550
49.5
AT2G23230
Arabidopsis thaliana
1.8e-143
511.1
604
46.2
AT4G13300
Arabidopsis thaliana
1.5e-134
481.5
543
45.7
AT3G32030
Arabidopsis thaliana
1.8e-127
458.0
580
44.3
AT3G14520
Arabidopsis thaliana
3.1e-127
457.2
611
42.6
AT1G31950
Arabidopsis thaliana
4.5e-126
453.4
551
44.3
AT3G14540
Arabidopsis thaliana
5.9e-126
453.0
605
42.5
AT1G70080
Arabidopsis thaliana
3.2e-124
447.2
555
42.3
AT4G13280
Arabidopsis thaliana
1.6e-123
444.9
544
44.3
AT1G33750
Arabidopsis thaliana
4.8e-120
433.3
547
42.8
AT3G14490
Arabidopsis thaliana
8.2e-120
432.6
572
43.2
AT3G29410
Arabidopsis thaliana
3.2e-116
420.6
608
38.8
AT5G48110
Arabidopsis thaliana
4.7e-115
416.8
565
40.2
AT5G23960
Arabidopsis thaliana
2.2e-80
301.6
556
33.1
AT4G16730
Arabidopsis thaliana
6.6e-53
210.3
507
27.0
AT3G25810
Arabidopsis thaliana
5.4e-39
164.1
563
24.7
AT4G16740
Arabidopsis thaliana
2.1e-38
162.2
560
24.3
AT2G24210
Arabidopsis thaliana
2.3e-37
158.7
559
24.7
AT3G25820
Arabidopsis thaliana
4.3e-36
154.5
565
23.0
AT3G25830
Arabidopsis thaliana
4.3e-36
154.5
565
23.0
AT1G61680
Arabidopsis thaliana
1.1e-34
149.8
572
23.8
Pp3c7_1880
Physcomitrella patens
1.1e-28
129.8
506
24.9
Pp3c7_1650
Physcomitrella patens
1.5e-28
129.4
506
24.3
AT2G37140
Arabidopsis thaliana
4.2e-07
58.2
112
29.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (31 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing