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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G18010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G18010
Arabidopsis thaliana
0.0e+00
1244.6
647
100.0
AT1G34120
Arabidopsis thaliana
4.5e-108
393.7
636
38.1
AT1G71710
Arabidopsis thaliana
1.8e-101
371.7
566
42.0
Pp3c27_3390
Physcomitrella patens
1.5e-98
362.1
631
37.7
AT2G32010
Arabidopsis thaliana
4.1e-93
344.0
657
37.1
AT3G63240
Arabidopsis thaliana
1.2e-92
342.4
633
36.2
Pp3c1_32995
Physcomitrella patens
5.0e-91
337.0
587
37.0
Pp3c1_32990
Physcomitrella patens
5.0e-91
337.0
587
37.0
AT1G05470
Arabidopsis thaliana
2.5e-90
334.7
658
38.3
Pp3c18_13030
Physcomitrella patens
2.5e-90
334.7
550
36.2
Pp3c22_8620
Physcomitrella patens
1.1e-88
329.3
634
34.4
Pp3c19_21170
Physcomitrella patens
3.1e-88
327.8
639
35.1
Pp3c21_6740
Physcomitrella patens
6.0e-84
313.5
573
35.8
AT2G37440
Arabidopsis thaliana
1.6e-81
305.4
608
32.6
AT5G65090
Arabidopsis thaliana
4.7e-81
303.9
515
36.7
AT5G04980
Arabidopsis thaliana
9.6e-74
279.6
517
37.9
AT2G01900
Arabidopsis thaliana
2.9e-62
241.5
248
48.0
FBgn0023508
Drosophila melanogaster
5.1e-43
177.6
244
40.6
Cre07.g352400
Chlamydomonas reinhardtii
2.5e-42
175.3
370
31.6
ENSG00000204084
Homo sapiens
5.7e-42
174.1
245
38.0
tho09120
Thalassiosira oceanica
5.7e-42
174.1
253
41.1
CM04G00800
Cyanidioschyzon merolae
2.8e-41
171.8
256
36.7
tps96360
Thalassiosira pseudonana
2.8e-41
171.8
278
38.1
ENSG00000122126
Homo sapiens
6.3e-41
170.6
250
36.8
CC00G108390
Cyclotella cryptica
2.4e-40
168.7
257
38.9
ENSG00000159082
Homo sapiens
2.4e-40
168.7
271
35.4
ps00G134480
Pseudo-nitzschia multiseries
9.0e-40
166.8
256
38.7
gsu65700
Galdieria sulphuraria
4.5e-39
164.5
247
37.2
FBgn0034691
Drosophila melanogaster
5.9e-39
164.1
263
36.5
ptri207600
Phaeodactylum tricornutum
1.0e-38
163.3
257
38.9
WBGene00006763
Caenorhabditis elegans
1.3e-38
162.9
244
38.1
gene8165
Fragilariopsis cylindrus
1.3e-38
162.9
256
37.9
PSNMU-V1.4_AUG-EV-PASAV3_0035030
Pseudo-nitzschia multistriata
2.2e-38
162.2
263
38.0
fso01860
Fistulifera solaris
2.9e-38
161.8
261
39.5
sya00G15890
Synedra acus
5.0e-38
161.0
257
38.9
fso110980
Fistulifera solaris
6.5e-38
160.6
261
39.5
emh105190
Emiliania huxleyi
7.2e-37
157.1
268
37.7
Sro1631_g287220
Seminavis robusta
2.3e-35
152.1
256
34.4
Naga_100007g108
Nannochloropsis gaditana
5.1e-35
151.0
263
36.9
YNL106C
Saccharomyces cerevisiae strain S288C
6.7e-35
150.6
273
32.6
Ec-26_000170
Ectocarpus siliculosus
1.9e-34
149.1
257
35.8
YOR109W
Saccharomyces cerevisiae strain S288C
7.4e-34
147.1
255
32.9
ENSG00000078269
Homo sapiens
2.2e-33
145.6
271
32.1
AT1G65580
Arabidopsis thaliana
3.7e-33
144.8
284
34.5
AT2G43900
Arabidopsis thaliana
5.3e-32
141.0
276
34.1
emh746130
Emiliania huxleyi
1.5e-31
139.4
202
40.1
YIL002C
Saccharomyces cerevisiae strain S288C
2.6e-31
138.7
240
36.2
SPBC577.13
Schizosaccharomyces pombe
3.4e-31
138.3
233
35.6
emh741740
Emiliania huxleyi
1.7e-30
136.0
242
33.1
AT2G31830
Arabidopsis thaliana
6.5e-30
134.0
278
32.4
SPBC2G2.02
Schizosaccharomyces pombe
8.5e-30
133.7
237
33.3
FBgn0034179
Drosophila melanogaster
1.1e-29
133.3
281
33.5
pte466450
Paramecium tetraurelia
3.2e-29
131.7
258
33.3
pte549610
Paramecium tetraurelia
7.2e-29
130.6
278
30.2
SPAC9G1.10c
Schizosaccharomyces pombe
1.6e-28
129.4
256
33.2
pte586100
Paramecium tetraurelia
3.6e-28
128.3
258
32.6
AT1G05630
Arabidopsis thaliana
5.1e-27
124.4
320
28.8
WBGene00007620
Caenorhabditis elegans
1.5e-26
122.9
250
34.0
ENSG00000165458
Homo sapiens
1.5e-26
122.9
263
34.2
ccr40360
Chondrus crispus
4.4e-26
121.3
334
26.6
Pp3c16_2270
Physcomitrella patens
5.7e-26
120.9
307
25.7
ccr45360
Chondrus crispus
2.2e-25
119.0
251
31.1
emh230600
Emiliania huxleyi
2.2e-25
119.0
266
31.2
ccr144180
Chondrus crispus
1.1e-24
116.7
229
31.0
ENSG00000148384
Homo sapiens
1.4e-24
116.3
247
34.0
emh168010
Emiliania huxleyi
6.9e-24
114.0
240
29.2
ENSG00000185133
Homo sapiens
6.9e-24
114.0
249
30.1
emh607630
Emiliania huxleyi
2.6e-23
112.1
253
30.8
Pp3c21_20640
Physcomitrella patens
1.3e-22
109.8
246
32.1
pte241180
Paramecium tetraurelia
3.8e-22
108.2
255
29.0
Pp3c18_1400
Physcomitrella patens
4.2e-21
104.8
246
30.1
Pp3c17_16770
Physcomitrella patens
5.5e-21
104.4
253
28.5
Pp3c1_31610
Physcomitrella patens
3.6e-20
101.7
250
28.8
tho181820
Thalassiosira oceanica
3.6e-20
101.7
271
29.2
Pp3c2_9260
Physcomitrella patens
1.4e-19
99.8
234
28.6
Ec-09_000920
Ectocarpus siliculosus
2.3e-19
99.0
162
38.9
Ec-16_002520
Ectocarpus siliculosus
5.2e-19
97.8
285
27.0
fso62760
Fistulifera solaris
5.2e-19
97.8
254
28.3
ENSG00000132376
Homo sapiens
5.2e-19
97.8
249
27.7
AA0012G02080
Aureococcus anophagefferens
1.1e-18
96.7
144
42.4
fso98070
Fistulifera solaris
1.5e-18
96.3
254
28.7
ps00G104910
Pseudo-nitzschia multiseries
5.7e-18
94.4
263
28.5
AT1G47510
Arabidopsis thaliana
7.4e-18
94.0
206
33.0
Cre12.g530050
Chlamydomonas reinhardtii
1.3e-17
93.2
342
25.4
Cre13.g563550
Chlamydomonas reinhardtii
1.7e-17
92.8
248
30.2
sya00G107600
Synedra acus
1.7e-17
92.8
290
27.6
WBGene00012016
Caenorhabditis elegans
3.7e-17
91.7
245
28.2
CC00G32700
Cyclotella cryptica
6.3e-17
90.9
244
28.7
Sro1296_g260340
Seminavis robusta
6.3e-17
90.9
274
26.6
Naga_100058g10
Nannochloropsis gaditana
1.8e-16
89.4
264
29.9
emh210980
Emiliania huxleyi
2.4e-16
89.0
235
29.8
Sro506_g156370
Seminavis robusta
7.0e-16
87.4
277
26.4
Ec-11_006280
Ectocarpus siliculosus
1.2e-15
86.7
141
36.9
PSNMU-V1.4_AUG-EV-PASAV3_0076400
Pseudo-nitzschia multistriata
2.0e-15
85.9
272
27.2
ptri174050
Phaeodactylum tricornutum
2.6e-15
85.5
278
25.9
FBgn0036273
Drosophila melanogaster
3.5e-15
85.1
206
31.6
sya00G43140
Synedra acus
7.7e-15
84.0
141
34.8
Cre11.g467546
Chlamydomonas reinhardtii
1.9e-13
79.3
131
35.1
CC00G08970
Cyclotella cryptica
3.2e-13
78.6
250
26.8
WBGene00086546
Caenorhabditis elegans
4.2e-13
78.2
192
29.2
emh470710
Emiliania huxleyi
9.4e-13
77.0
221
27.1
emh351860
Emiliania huxleyi
9.4e-13
77.0
221
27.1
tps73790
Thalassiosira pseudonana
1.2e-12
76.6
268
26.1
ptri187660
Phaeodactylum tricornutum
4.7e-12
74.7
225
27.1
tho112400
Thalassiosira oceanica
4.7e-12
74.7
265
24.5
fso12840
Fistulifera solaris
6.1e-12
74.3
269
25.3
fso75480
Fistulifera solaris
6.1e-12
74.3
246
25.6
pte155260
Paramecium tetraurelia
8.0e-12
73.9
283
24.4
ccr123620
Chondrus crispus
1.8e-11
72.8
189
29.1
AA0013G01530
Aureococcus anophagefferens
4.0e-11
71.6
125
32.8
CC00G52380
Cyclotella cryptica
1.2e-10
70.1
223
24.2
gene6356
Fragilariopsis cylindrus
2.2e-09
65.9
91
40.7
Naga_100042g21
Nannochloropsis gaditana
2.4e-08
62.4
137
29.9
AA0028G00150
Aureococcus anophagefferens
4.1e-08
61.6
158
31.0
AA0003G01940
Aureococcus anophagefferens
3.8e-06
55.1
210
26.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing