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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G16820
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G16820
Arabidopsis thaliana
2.7e-297
1021.9
518
100.0
AT2G44810
Arabidopsis thaliana
9.0e-91
335.9
364
49.5
AT1G51440
Arabidopsis thaliana
1.9e-72
275.0
362
43.6
AT2G30550
Arabidopsis thaliana
1.6e-71
271.9
379
42.7
AT1G06800
Arabidopsis thaliana
8.8e-70
266.2
370
43.0
AT1G30370
Arabidopsis thaliana
3.3e-69
264.2
376
41.2
Pp3c4_16570
Physcomitrella patens
1.5e-66
255.4
403
37.7
Pp3c23_13660
Physcomitrella patens
1.4e-64
248.8
377
41.6
Pp3c22_270
Physcomitrella patens
1.3e-57
225.7
386
36.5
AT2G31690
Arabidopsis thaliana
2.5e-56
221.5
366
38.3
AT1G05800
Arabidopsis thaliana
7.2e-56
219.9
367
37.9
Pp3c12_7930
Physcomitrella patens
4.4e-53
210.7
368
39.1
Pp3c22_301
Physcomitrella patens
9.7e-53
209.5
369
36.0
Pp3c22_300
Physcomitrella patens
9.7e-53
209.5
369
36.0
AT4G18550
Arabidopsis thaliana
4.2e-48
194.1
384
32.0
AT2G31100
Arabidopsis thaliana
2.3e-46
188.3
380
31.1
AT1G06250
Arabidopsis thaliana
1.2e-45
186.0
380
32.4
Pp3c4_20200
Physcomitrella patens
7.5e-45
183.3
467
31.0
AT2G42690
Arabidopsis thaliana
5.4e-43
177.2
387
34.1
Pp3c1_35340
Physcomitrella patens
2.0e-18
95.5
228
32.5
Ec-16_000950
Ectocarpus siliculosus
4.7e-15
84.3
382
24.1
Ec-16_003710
Ectocarpus siliculosus
1.2e-13
79.7
395
24.6
Cre09.g391986
Chlamydomonas reinhardtii
2.4e-11
72.0
314
27.4
CC00G178200
Cyclotella cryptica
2.1e-10
68.9
167
30.5
AT4G13550
Arabidopsis thaliana
7.8e-10
67.0
161
33.5
CM16G01580
Cyanidioschyzon merolae
2.3e-09
65.5
165
32.1
Ec-06_004240
Ectocarpus siliculosus
2.3e-09
65.5
119
37.0
pte426810
Paramecium tetraurelia
3.9e-09
64.7
170
32.9
Cre01.g002400
Chlamydomonas reinhardtii
1.1e-08
63.2
91
39.6
Naga_100101g12
Nannochloropsis gaditana
5.6e-08
60.8
159
30.2
ps00G182310
Pseudo-nitzschia multiseries
7.3e-08
60.5
165
27.3
Naga_100091g1
Nannochloropsis gaditana
1.6e-07
59.3
160
30.6
AT5G18640
Arabidopsis thaliana
2.8e-07
58.5
151
30.5
Ec-15_000240
Ectocarpus siliculosus
2.8e-07
58.5
156
30.1
Pp3c16_6180
Physcomitrella patens
3.6e-07
58.2
163
28.2
sya00G110920
Synedra acus
3.6e-07
58.2
158
26.6
Cre14.g611552
Chlamydomonas reinhardtii
4.7e-07
57.8
154
32.5
pte360870
Paramecium tetraurelia
4.7e-07
57.8
153
32.0
tho69840
Thalassiosira oceanica
4.7e-07
57.8
228
29.8
tps00820
Thalassiosira pseudonana
4.7e-07
57.8
167
26.9
emh242610
Emiliania huxleyi
6.2e-07
57.4
173
32.9
Pp3c7_2230
Physcomitrella patens
6.2e-07
57.4
151
28.5
gsu103170
Galdieria sulphuraria
1.1e-06
56.6
149
30.2
ccr44040
Chondrus crispus
1.4e-06
56.2
110
34.5
Pp3c25_13720
Physcomitrella patens
1.4e-06
56.2
153
30.1
AT5G18630
Arabidopsis thaliana
2.3e-06
55.5
151
29.8
WBGene00013949
Caenorhabditis elegans
2.3e-06
55.5
135
31.9
WBGene00013950
Caenorhabditis elegans
2.3e-06
55.5
135
32.6
Naga_100180g7
Nannochloropsis gaditana
2.3e-06
55.5
70
41.4
gene15767
Fragilariopsis cylindrus
3.1e-06
55.1
174
26.4
PSNMU-V1.4_AUG-EV-PASAV3_0019450
Pseudo-nitzschia multistriata
3.1e-06
55.1
165
27.9
sya00G263630
Synedra acus
3.1e-06
55.1
172
23.8
Naga_100529g6
Nannochloropsis gaditana
4.0e-06
54.7
148
30.4
PSNMU-V1.4_AUG-EV-PASAV3_0119440
Pseudo-nitzschia multistriata
4.0e-06
54.7
209
27.8
Pp3c5_26430
Physcomitrella patens
4.0e-06
54.7
151
29.8
emh743360
Emiliania huxleyi
5.2e-06
54.3
78
37.2
Naga_100016g73
Nannochloropsis gaditana
6.8e-06
53.9
161
31.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (0 genes)
Synedra acus (2 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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